Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30768g00007 ATGTCATTCTCAGAAAGACCGAGTATGATGGAGAGGCTAAGATCACTCTTCGGCGGTGGTGGCCGTGCAAAGAACAATCCTTCGAGATCCTTTAGGCTAGGAGTGAAGAAAGGATCAGCAGGACTCAGAACATTTGGAAGGTCACTGAAAACTGGTGTAACTACTTGGGCAGTGTTCCCTGAAGATCTCAAAGTTTCAGAGAAGAAAGTGTTTGATCCTCAGGACAAGACCCTTCTCTATTGGAACAAGTTCTTTGAGATCCTCTGCATTTTTTCAGTAGCTGTTGACCCTTTCTTCTTCTATCTCCCTTACTTCAACCTCAAGTCTTATTGCCTCGCCATAGATAGCACCTTGGCGAATTTTACAGCTGCACTGAGGACCATATTGGATTCTATCTATCTCCTGCGCATAAGCTTTCAGTTCCGAACTGCTTATATCGCGCCTTCATCTCGTGTGTTCGGACGAGGTGAACTCGTCATAGATCCTGCAAAGATTGCCAGTAGATATTTAAGGCGATATTGCATTGTTGACTTCTTGTCTGTGCTTCCTGTGCCACAGGTTTGA 564 0.4486 MSFSERPSMMERLRSLFGGGGRAKNNPSRSFRLGVKKGSAGLRTFGRSLKTGVTTWAVFPEDLKVSEKKVFDPQDKTLLYWNKFFEILCIFSVAVDPFFFYLPYFNLKSYCLAIDSTLANFTAALRTILDSIYLLRISFQFRTAYIAPSSRVFGRGELVIDPAKIASRYLRRYCIVDFLSVLPVPQV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30768g00007 187 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 62 187 - -
Stsc30768g00007 187 SUPERFAMILY Voltage-gated potassium channels 72 186 - -
Stsc30768g00007 187 Pfam Ion transport protein 80 186 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30768g00007 Stsc-Chr30768 24002 24565 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30768g00007 22 187 Ion Channels AT5G57940 65.663 2.25e-67 216