Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30764g00002 ATGATCTTTGGTCTCCAATCAAGTGCTGGTGCACCGGTGACCGGAGGAACGCTCAGTAATTTCAACGCCCTAAAGGTGGAATGCATGCACAACTTCGGGATAACTCCTACGAACAATGATGTGAGAGGGAGTTTCATTAAGTTAACGTGGCTCCGTATGGTGAAAAAAGGCATGCAGCTAACCGTTGGGGATTTTCACTCGACCGTGACCTCATCTTGCAAATTCAGCAATGCTGCTCATACTATTGAGCATGAGGAGTTCAGATTTTCCCCTGAAGATGTAGCATTGGCATATGATATGTATTTACTACAGCAGCTTTGCAGCGGGGTTGATGAAAATGCAATTGGGGCTTGTGCTCAATTGGCATCCTTGGTATTCATCTTTGCGAACCAAGCCGGACTCGACATGCTCGAAACTACTCTTGTTGCCCTTCAAGACATTATGCTTGACAAAGTTCTTTGTTCTGAGTTCTCCAAGGTTATGCAGCAGGCCCGTGTCTTATGA 504 0.4583 MIFGLQSSAGAPVTGGTLSNFNALKVECMHNFGITPTNNDVRGSFIKLTWLRMVKKGMQLTVGDFHSTVTSSCKFSNAAHTIEHEEFRFSPEDVALAYDMYLLQQLCSGVDENAIGACAQLASLVFIFANQAGLDMLETTLVALQDIMLDKVLCSEFSKVMQQARVL 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30764g00002 167 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 123 164 IPR044830 GO:0003700
Stsc30764g00002 167 Pfam MEKHLA domain 112 156 IPR013978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30764g00002 Stsc-Chr30764 9539 13146 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30764g00002 102 164 Homeobox Transcription Factor Family AT1G30490 61.644 8.93e-16 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30764g00002 K09338 - aip:110269410 73.559