Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30763g00004 ATGGCTTCAAAGCTCCACGACAACGCAGGATCTACTCTCACTCCCGCTCGCAAGGTTCGCGTTGTGGCCAAACTCCGAGGAATTTCGCGTCACGAGCCTGATTCTGAGCCTAAGCCGAATTCATGGATCTCGGTGAATAAGCCACAAGGGGAGAGTTTTGAGGGTGTTACTTTATCCTTTGGAGAACAATCTTCTAGTCGGTATTGGATGGACTATTGCTACGAGGAACATGAGGAGAATGAATTAATATATACAAGAGAGATTAAGCCGCTTATTTCAGCAGCGTTTGAAGGTCAGAATAGCACCGTTATTGCGTGTGGAGCTAGAGGCAGTGGCAAGACCCACCTAATTCAGGGTTCTGCTGAGAAACCGGGTCTGACAATGCTTGCTATTGCGGAATTCATCTCCTTGGCTGAGAAAAATGGGAAGTCTATATCCGTTTCTTTCTATGAAGTTGATCACCAGGATCATGCTGTTGATTTATTAAATCCAGGTCAATCACCAATTTTAGTTTGTGAAGATCGTGGCAGAATTCAGTTTAAAGGACTAAGTCAAATTCCTGTGAAATCCGTTGCTGAATTTCAGAACTTTTACTTTGGTGCATGTTCTACGCAAAAGACTATCCCAAGAAAGGGCTTTGAACGTGCTTCTAGAAGTCACATGGGATTAATTGTGTATGTATTTTCTCAAAATGCAAGTGTAGAAAATGGTCCTGTGAGCAAAATGAGTTTCGTTGATTTGGCAGGTTATGAAGATGCTAGAAAGAAAAGTAGTGATGCCATTTGCTTTGCCGAGACTAACAAAATTAACAAGTCTATTTATGCCTTACTGAGTGTTTCTCATGCTTTGAGCTCCAATGAAAGCCGTGTTCCCTATCGAGAAAGCAAACTTACACGCATGTTGCAAGATTCCTTGAGGGGGACTAGCAGAATTTTGATAGTTGCCTGTTTGAACCCATCATTTTGTCAAGATACTGTTTACATGGTAAACTTAGCATCACGATCATGTCAATCAATTCAAAAGACATTCTTAGATTCAACAAAGAAGATTTCAAGTTCAGCAAACCAGATTAAGACTTATCAGAAGAGCCAGATAACCAAAAGTGTTTCCACAACCACTAAGAAAATACCTGCCTCCGTATCGTATCAATCTGAAAAGAAAGTTGTTGCTGCTCCAAAGTCTGCAATCAAAGCAAGGAAATTATTTGATGAAGCAAGCAAGTCTACTGCTAGAGCTAAAAAGGAAATTCGCATGGTACAAAATTCATCTGAGACTCTATTGGTAAACCAGGACAATTCACTAGACATTACTGGAAATAAGGTTGAATCCAACACTAAAGTGGTAAAGGATAATTCACCCCCAAATGTTAGTAAGAATGTGAAATGCGATCTAATGGCAGAAAATGGTGATTCATCTTTGGATACTAGCAGTGAAGTGGAAATCTACCCTATAGAGGAAAAGGGAATTTCTCTCAATGGAGAGGATCATCAAGATGCCAGTAATTTCTCTGAAGCGGTGGAACTAGTTCGAGAAGACCTTAACATGAACAAGGAGAATAGTTTAATGCTAAATGAGCAAGGAGAACAAGCGTTGGCAATTGTTCCGGAAGGTCAAAGCATAAACAAAGAGAACAAAAGTTCAATGGCATATGAAGATGGTTCTACACCAATCAGTTCTCAATTGCGTGATCTTTCTAACCGTCTTAAATTGCTCTATTCGTCGACTCCATTATCTGTGCAGATACCAGAAAAGGAATGCAGTTCACTTGATAGCATATCTGTAGATATCATGGAACCAAAAACTCCTGTAGTTGACCAAATTACGCGTGCTAATGATAGAAGGGATATAATGAATCCCAAAAGTCCATGGGAAACATTTAGTGTGCATAATTCTGGAGTCAAGAATAATCTTGTCGAAGAATATCTAAGATTTTTAAACTCAGCTAACAAGGAAGAATTGAAAAAATTAAAGGGAATTGGAGAGAAGAGAGCAACCTACATACTTGAGCTTCGCGAAGAATCTCCTGAGCCTTTCAAAAGTCTCGATGACTTAAAGGATATTGGACTTTCAGCAAAGCAGATCAAGGGAATGATGAAAAAGGAAGTTGGAGAGCTTTTCAATTAG 2124 0.3969 MASKLHDNAGSTLTPARKVRVVAKLRGISRHEPDSEPKPNSWISVNKPQGESFEGVTLSFGEQSSSRYWMDYCYEEHEENELIYTREIKPLISAAFEGQNSTVIACGARGSGKTHLIQGSAEKPGLTMLAIAEFISLAEKNGKSISVSFYEVDHQDHAVDLLNPGQSPILVCEDRGRIQFKGLSQIPVKSVAEFQNFYFGACSTQKTIPRKGFERASRSHMGLIVYVFSQNASVENGPVSKMSFVDLAGYEDARKKSSDAICFAETNKINKSIYALLSVSHALSSNESRVPYRESKLTRMLQDSLRGTSRILIVACLNPSFCQDTVYMVNLASRSCQSIQKTFLDSTKKISSSANQIKTYQKSQITKSVSTTTKKIPASVSYQSEKKVVAAPKSAIKARKLFDEASKSTARAKKEIRMVQNSSETLLVNQDNSLDITGNKVESNTKVVKDNSPPNVSKNVKCDLMAENGDSSLDTSSEVEIYPIEEKGISLNGEDHQDASNFSEAVELVREDLNMNKENSLMLNEQGEQALAIVPEGQSINKENKSSMAYEDGSTPISSQLRDLSNRLKLLYSSTPLSVQIPEKECSSLDSISVDIMEPKTPVVDQITRANDRRDIMNPKSPWETFSVHNSGVKNNLVEEYLRFLNSANKEELKKLKGIGEKRATYILELREESPEPFKSLDDLKDIGLSAKQIKGMMKKEVGELFN 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30763g00004 707 Pfam Helix-hairpin-helix motif 645 692 - -
Stsc30763g00004 707 SMART kinesin_4 16 342 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc30763g00004 707 PANTHER KINESIN-RELATED 58 523 IPR027640 GO:0003777|GO:0007018
Stsc30763g00004 707 SUPERFAMILY RuvA domain 2-like 639 700 IPR010994 -
Stsc30763g00004 707 ProSiteProfiles Kinesin motor domain profile. 18 338 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc30763g00004 707 PRINTS Kinesin heavy chain signature 241 259 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc30763g00004 707 PRINTS Kinesin heavy chain signature 290 311 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc30763g00004 707 PRINTS Kinesin heavy chain signature 98 119 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc30763g00004 707 PRINTS Kinesin heavy chain signature 210 227 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc30763g00004 707 Pfam Kinesin motor domain 41 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc30763g00004 707 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 350 IPR027417 -
Stsc30763g00004 707 FunFam Kinesin-like protein KIN-10C 631 705 - -
Stsc30763g00004 707 Gene3D - 632 705 - -
Stsc30763g00004 707 Gene3D Kinesin motor domain 16 378 IPR036961 -
Stsc30763g00004 707 MobiDBLite consensus disorder prediction 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30763g00004 Stsc-Chr30763 11537 16450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30763g00004 87 320 Calmodulin-binding Proteins AT5G65930 33.610 7.53e-29 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30763g00004 K10403 - gmx:100809612 760.755