Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30760g00002 ATGGGATGTACAAATTTGGTGTTGCATGTTCGAGTGTTTGTCACTTTGATGGTGATTTTTGCTGCAACTTTCTCTGCAGTTGGAGACACTGATGTAGTTGATGTTGCAGCAATCAATAGTCTATATGTTGCTCTTGGCTCACCACCTCTTCTAGGGTGGAAGCCTGTGGGAGGAGATCCATGTTTTGAAATGTGGCAAGGTGTTGGCTGTGTATTTTCCAACATCACTTCCATAAGACTTGATGGCCTGAATTTGGGTGGAGAGCTTGGCAGTAATCTGAATTTTCCATCCATCTTAGAAATTGATCTTAGCAATAACCACATTGGAGGGCCCATTCCATTCACTTTGCCCCCTACTATAACAAGCTTGTCTCTCTCAGGAAACCAGCTAAATGGAAGCATTCCAGATGCATTATCATTACTAACTCAATTGTCACACTTGGATTTGTCAAGTAACAACCTGAGTGGTCAGCTGCCTTCCTCAACAGTTACTTTATCATCCCTTACTACATTATACTTGCAGAACAATCAACTCTCCGGGACCCTTTATGTTTTGCAGGACCTGCCTCTTCAGGAGCTGAATATTGAGAATAACTCATTCTCTGGGCCAATTCCTCCAAAGTTGCTGAGTGTCCCTATTTTCAGAAAAGATGGAAATCCATTTAATACTAGTGTTATTCCATCACCTGCCGCAGCCCCATCACCTGCAGCTATGGCTTCGTCCCCTGGGAAATCACCATGGAGAGCCGCAAATAGTCCTTCTTCCCCAACAGCATCAATGTTTGCAAGTGCTAGGAAGTCATTTGTAGCTAAGAACATAATTTGGATTGCTGGTGCTGTTCTTTTGATAGTTATTTTGTTAGGAGTTTGTATCTTTATGTTCTGGTGCTTTAAGCGGAGGCCCGAAAAGAAAATTGTTAACAAGCAAAATGTTGGTGTCTTCAAAAGTCCTCCACATAATTCTACATGCAGTGACACTTCCTTTGAAGCAACTAATCAGGAGGAGAAAGATATTAAGAAACCATCACTTGTATCTGAAGTGCCAAATAAAAGAACAAATTTGATTCCAAAGGTTCAGGATGAACAAGAAAAATATGTGAAAACGGAAGAATCTGCAACTTCGCAATACAATCATGGTTCTGAGTTAATCAACACTAGTGAAGCTTCCAAACTTTCACACCTTCAGCCACCACCACGTCATCACACAACTACACAAGGTCAGAAGTTGATCCTCAATCCAGCTATACCTGCCAAAGGGTCTGAAATAAATGACAAAGCAAGTTCCCTTGAAGTTTATTCTATTGCATCACTTCAACAATATACCAATAGCTTTTCCCAAGAAAATTTCATTGGGGAAGGCACCCTAGGGCCTGTTTATAGGGCTGAGTTACCTGATGGAAAGATATTGGCTGTGAGGAAATTAGATGCCACTGCTTCTATGGATCAGAACCATGAACAATTTCTCCAATTAGTGTCCAACATCTCAAAACTTCAGCACCCTAATATTGTAAAGTTTATGGGCTACTGTGCTGAGCATAGCCAAAGGCTGCTTGTATATGAGTATTGCAGCAATGGAACCCTGCATGATGCACTGCATGGCGACGAAGAATGCCGTATTAAACTAACTTGGAATGCTCGAATTCAGGTGGCTCTTGGAGCTGCAAGAGCTTTAGAGTATATGCATGAGAACTTCCGGCCGCCTATTGTGCATCGAAATTTTAAGTCTGCTAATGTTCTCCTAAATGACAACTTGGAAGTGTGCATATCTGATTGTGGATTAGGTCCTTTGCTATCTTCTGGCTCTGCTGGTCAGTTATCAGGACGACTTCTCACTGCTTATGGTTACAGTGCTCCTGAATTCGAGTTCGGAAGCTATACACATCAAAGTGATGTCTTCAGTTTTGGAGTGGTAATGCTGGAACTTCTCACTGGACGAAAATCGCATGACAGGTCACTTCCTCGCGGGGAGCAAATATTGGTGAGATGGGCAGTCCCTCAACTCCATGACATCGATGCACTGTCAAAAATGGTTGACCCCAGCTTAAAAGGAGCCTATCCTATCAAGTCCTTGTCGCGTTTTGCAGATATTGTTTCTTCATGTGTCCAGCATGAACCTGAATTCAGGCCAGCAATGTCTGAAGTCGTTCAAGATCTTCTAAGGATGATGTAA 2169 0.4232 MGCTNLVLHVRVFVTLMVIFAATFSAVGDTDVVDVAAINSLYVALGSPPLLGWKPVGGDPCFEMWQGVGCVFSNITSIRLDGLNLGGELGSNLNFPSILEIDLSNNHIGGPIPFTLPPTITSLSLSGNQLNGSIPDALSLLTQLSHLDLSSNNLSGQLPSSTVTLSSLTTLYLQNNQLSGTLYVLQDLPLQELNIENNSFSGPIPPKLLSVPIFRKDGNPFNTSVIPSPAAAPSPAAMASSPGKSPWRAANSPSSPTASMFASARKSFVAKNIIWIAGAVLLIVILLGVCIFMFWCFKRRPEKKIVNKQNVGVFKSPPHNSTCSDTSFEATNQEEKDIKKPSLVSEVPNKRTNLIPKVQDEQEKYVKTEESATSQYNHGSELINTSEASKLSHLQPPPRHHTTTQGQKLILNPAIPAKGSEINDKASSLEVYSIASLQQYTNSFSQENFIGEGTLGPVYRAELPDGKILAVRKLDATASMDQNHEQFLQLVSNISKLQHPNIVKFMGYCAEHSQRLLVYEYCSNGTLHDALHGDEECRIKLTWNARIQVALGAARALEYMHENFRPPIVHRNFKSANVLLNDNLEVCISDCGLGPLLSSGSAGQLSGRLLTAYGYSAPEFEFGSYTHQSDVFSFGVVMLELLTGRKSHDRSLPRGEQILVRWAVPQLHDIDALSKMVDPSLKGAYPIKSLSRFADIVSSCVQHEPEFRPAMSEVVQDLLRMM 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30760g00002 722 SUPERFAMILY Protein kinase-like (PK-like) 427 718 IPR011009 -
Stsc30760g00002 722 MobiDBLite consensus disorder prediction 232 252 - -
Stsc30760g00002 722 Coils Coil 715 722 - -
Stsc30760g00002 722 Pfam Protein tyrosine and serine/threonine kinase 447 718 IPR001245 GO:0004672|GO:0006468
Stsc30760g00002 722 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 720 IPR046959 -
Stsc30760g00002 722 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 31 147 - -
Stsc30760g00002 722 Gene3D Ribonuclease Inhibitor 36 232 IPR032675 -
Stsc30760g00002 722 Gene3D Transferase(Phosphotransferase) domain 1 522 722 - -
Stsc30760g00002 722 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 522 722 - -
Stsc30760g00002 722 SUPERFAMILY L domain-like 34 208 - -
Stsc30760g00002 722 ProSiteProfiles Protein kinase domain profile. 444 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30760g00002 722 Gene3D Phosphorylase Kinase; domain 1 414 521 - -
Stsc30760g00002 722 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 415 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30760g00002 Stsc-Chr30760 10539 14944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30760g00002 30 722 Strubbelig Receptor Gene Family AT4G03390 50.804 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Stsc30760g00002 PK_Tyr_Ser-Thr 3.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30760g00002 - - ahf:112783685 1237.63