Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30754g00004 ATGAAACAGGAAGATTGTATCTATCTGAATATAAGAATGGTGCTGCTAACAGTGGTAGCAGCTTTATTGGGTGGATATGCATTTGTATTTGGGTTTCTGAGGAAGATAAATAATTGGTACTATGTTTGGAGTGTGGCAAAAACCAAATACCCTCTTCCACCTGGTGATATGGGTTGGCCTTTCCTCGGTAACATGCCATCCTTCCTCACAGCTTTCAAGTCATCCGACCCTGATTCCTTCATCCATAACCTTATTTCCAGATATGGGAGGACAGGGATGTATAGGACTCATCTGTTTGGATGTCCAAGCATAATAGTGTGCAGCCCAGAGACATGCAGAAAGGTTCTAACAGATGATGATAAACTCAAGCTTGGTTACCCGGCTTCTACCATGGCTCTTGTAGGCAAAAGATCATTCCATGGCATATCAAACGCAGAGCACAAGCGCCTTCGTCGCCTTACCACTGCTCCAATAACTGGCCACGAGGCCTTGTCCATGTATGTTTCTCTCATCGAGGACATTTCCGTCAAAACACTCCATGATTTGAGTAACATGGACTCACCCTTTGAGTTCCTCGTGGAGATGAGGAAGTTTGCATTCCAGGTATTCACCACCATCTTTTTGGGCTTTGATGATGATGCCGATGATCACGTTGACCTTGGCATGGTGGAGAACTTGTACACTCTCTTGAATCTTGGAATGAAGTCCATGGCCATCAATCTTCCTGGCTTTGCTTTCCATAGGGCCCTCAAGGCACGAAAGAAGCTCAAGAGGCTGCTTGAAGGGGTTTTGGAGAGAAAGAGGAATAATGAGACAAATAAGATGATGATGATGAGGAGAGATTTGATGAAAGTATTGATGGAAGTGAAAGATGAAGAGGGTAGGCAGCTGGAAGATGAAGATATCATAGACTTACTTCTCATATTCTTGTTGGCCGGTCACGAAAGCTCTGCTCATGGCATCTTGTGGACCATCATCTACCTCACCCAACACCCTCTTCTCTTCCTAACGGCTAAGAGAGAACAACAAGATATCATTAACACAAGGCCTTCCACCCAGACAGGATTGGACATCAAGGAAATTAAGCGCATGACTTATTTATCAAAGGTTATTGATGAGATGCTGCGCAGGACAACTATCTCCTTTGCAAATTTTAGACAGGCAAAAGTGGATGTTAACATCAATGGTTACACAATACCAAAAGAATGGAAAATCCTGGTTTGGAACAGAGGAGTTCACATGGATCCTGAAACTTATCTCAACCCAAACGAATTTGATCCTTCCAGATGGGATAATTACACACCAAGAGCAGGGTCTTTCCTTCCCTTCGGATTAGGAAGTCGGTTATGCCCTGGAGGCGACCTAGCCAAGCTTGAGATCACCATTTTCCTCCATCATTTTCTTCTAAATTACAAAATGGAGAGGGTTAATCCTGATTGTCCGGTGATTTACTTACCTGTGCCAAGGCCAAGTGATAACTGCCTTGCAAGAATTGTGAAAGCCACATAA 1509 0.4374 MKQEDCIYLNIRMVLLTVVAALLGGYAFVFGFLRKINNWYYVWSVAKTKYPLPPGDMGWPFLGNMPSFLTAFKSSDPDSFIHNLISRYGRTGMYRTHLFGCPSIIVCSPETCRKVLTDDDKLKLGYPASTMALVGKRSFHGISNAEHKRLRRLTTAPITGHEALSMYVSLIEDISVKTLHDLSNMDSPFEFLVEMRKFAFQVFTTIFLGFDDDADDHVDLGMVENLYTLLNLGMKSMAINLPGFAFHRALKARKKLKRLLEGVLERKRNNETNKMMMMRRDLMKVLMEVKDEEGRQLEDEDIIDLLLIFLLAGHESSAHGILWTIIYLTQHPLLFLTAKREQQDIINTRPSTQTGLDIKEIKRMTYLSKVIDEMLRRTTISFANFRQAKVDVNINGYTIPKEWKILVWNRGVHMDPETYLNPNEFDPSRWDNYTPRAGSFLPFGLGSRLCPGGDLAKLEITIFLHHFLLNYKMERVNPDCPVIYLPVPRPSDNCLARIVKAT 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30754g00004 502 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30754g00004 502 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30754g00004 502 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30754g00004 502 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30754g00004 502 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30754g00004 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Stsc30754g00004 502 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30754g00004 502 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30754g00004 502 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30754g00004 502 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30754g00004 502 Pfam Cytochrome P450 53 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30754g00004 502 SUPERFAMILY Cytochrome P450 49 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30754g00004 502 Gene3D Cytochrome P450 43 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30754g00004 502 PANTHER CYTOCHROME P450 26 49 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30754g00004 Stsc-Chr30754 23752 27296 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30754g00004 32 498 Cytochrome P450 AT1G05160 53.846 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30754g00004 K04123 K17875 qsu:112005461 642.499