Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30746g00006 CTACCCTCGCACATCGCCGCCTCGAGCCTTCCCCTTCGCAGCCTCAGCCTCACCCGCCGCCGTGCAGCCGCTCTCAACCGCGCCGCTGCCATCTTCTCCCCTTCCCTGTCTGCTATTCTCTACAGGGTTTTGGTCTCCCATGGACATGAATTTTTGAATGGAGAGCACTATCCGATCAAAGAGACGGACGGTAGTGTTCCCAATACTCTCGTCATTGCTACATGCGATGTTGTCAAGCCTCGGGTTGCAGCTACAGAACACATTTCTCAGTTTAATGAGGAGGCTGGCTCCCCATTTGTCAAGAAATATAAGATTATCATTCATCCAGGAAAGGCTGCAATGTCAAGGCGGTTAAATGATGTGAATGATGGCGGTGTTCCATTGGATTCGGTCTCTGCGAACCTTGCTAAGCTCGGAAAGGAAGCAATGCAAAGAAAAGCTCTCGCTTCTGCAGTTGCTGCTGAAGCATTTGAGGAGGCCAATGCTACTGAATGTATTATCAGAAATTTAAGGGGATGCATAGATAAAAAGCTAATTGATGAGCAGTTAAAGCACTGCTCTTTATGCAATGCTCACTTGGGTTGTTCTCCACTTGATAAATTAAGAATACGCGTTTTACACTCTAAGTCAATTTTATCAGCTTTCTATCTTTGGATCTGCTTTTATACTTCTCATGGTAAGTTTGTATCGCTGCTATGA 699 0.4621 LPSHIAASSLPLRSLSLTRRRAAALNRAAAIFSPSLSAILYRVLVSHGHEFLNGEHYPIKETDGSVPNTLVIATCDVVKPRVAATEHISQFNEEAGSPFVKKYKIIIHPGKAAMSRRLNDVNDGGVPLDSVSANLAKLGKEAMQRKALASAVAAEAFEEANATECIIRNLRGCIDKKLIDEQLKHCSLCNAHLGCSPLDKLRIRVLHSKSILSAFYLWICFYTSHGKFVSLL 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30746g00006 232 Pfam Plant protein of unknown function (DUF936) 120 171 IPR010341 -
Stsc30746g00006 232 PANTHER EXPRESSED PROTEIN 118 170 IPR010341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30746g00006 Stsc-Chr30746 30674 33308 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30746g00006 138 202 C3H Transcription Factor Family AT3G23060 37.879 1.62e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30746g00006 K10752 - ncol:116246157 96.6709