Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30741g00003 ATGTTTCTCGATAAAATGGACAAGTTCATCGACAACTTGACGCCGATGGATCTGATGCGATCGGAGAAGATGACCTTCGTCCAGCTCATCATCCCCGCCGAGTCCGCTCACCGAGCCATCTCCTACCTCGGCGAACTCGGCCTCCTCCAATTCCGCGACTTAAATGCTGATAAAAGCCCATTCCAGAGAACGTTTGTTAATCAGGTAAAGCGATGTGCGGAAATGTCACGGAAGCTAAGATTCTTCAAGGATCAAATCAATAAAGCTGGCTTAATGTCTTCTTCTCATACTGTATTGCAACCAGACATTGACTTGGAGGATTTAGAGATACAACTTGCTGACCATGAACATGAGCTAATTGAAATGAATTCCAACAGTGACAAACTTCGGCAATCATATAATGAACTCCTAGAGTTCAAGATTGTATTGCAGAAGGCATGTGGTTTTCTTGTTTCAAGTCATGGCCGTGCTATTCCCGACGAGAGGGAACTACAAGAGAATGTGTACTCAAATGATGGCTTTGTTGAAACAGCATCTTTGCTTGAACAGGAAATAAGGCCTGGACCGTCAAATCCATCTGGTTTAAGATTTATCAGTGGGATAATTTGTAAATCCAAGCTAATTCGGTTTGAAAGGATGTTGTTTCGTGCTACAAGAGGCAACATGCTTTTCAATCAGGCACCAGCTGATGAGCAAATCATGGATCCTGTTTCAGCTGAAATGATTGAGAAAACAGTGTTCGTTGTGTTTTTCTCTGGGGAGCAGGCAAGAACTAAGATTCTGAAAATTTGTGAGGCATTTGGTGCAAATTGTTATCCTGTTCCTGAAGATATAAGCAAGCAGAGACAAATAACAAGAGAGGTTTCATCACGCCTTACTGACTTAGAGGCAACTTTGGATGCTGGGTTGAGGCACCGCAATAAGGCTCTAGCTTCTCTAGGGGAACATCTATCAGATTGGATGAACATGGTAAGAAGAGAGAAGGCCGTGTATGATACACTGAACATGTTAAATTTTGATGTCACAAAAAAGTGTCTTGTTGGAGAGGGATGGTGCCCTATATTTGCAAAAACACAGATTCAGGAGGCATTGCAACGTGCAACTTTTGATAGCAGTTCTCAAGTAGGCATAATCTGCCATCCTATGGATGCAGTGGAATCACCACCTACATATTTTAGGACCAACAGTTTCACAAGTCCATATCAGGAAATTGTTGATGCATATGGGAATGTGAGGCAAGACGCTATACTTCTGTGA 1257 0.4256 MFLDKMDKFIDNLTPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNADKSPFQRTFVNQVKRCAEMSRKLRFFKDQINKAGLMSSSHTVLQPDIDLEDLEIQLADHEHELIEMNSNSDKLRQSYNELLEFKIVLQKACGFLVSSHGRAIPDERELQENVYSNDGFVETASLLEQEIRPGPSNPSGLRFISGIICKSKLIRFERMLFRATRGNMLFNQAPADEQIMDPVSAEMIEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLTDLEATLDAGLRHRNKALASLGEHLSDWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKTQIQEALQRATFDSSSQVGIICHPMDAVESPPTYFRTNSFTSPYQEIVDAYGNVRQDAILL 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30741g00003 418 Coils Coil 105 132 - -
Stsc30741g00003 418 Pfam V-type ATPase 116kDa subunit family 42 409 IPR002490 GO:0033179|GO:0046961|GO:1902600
Stsc30741g00003 418 PANTHER VACUOLAR PROTON ATPASES 18 409 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30741g00003 Stsc-Chr30741 8113 12471 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30741g00003 6 412 Primary Pumps ATPases(2) AT2G28520 78.133 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30741g00003 K02154 - gmx:100776037 737.258