Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30741g00002 ATGTTTGGGGATTGGGGTCATGGAATTTGCCTGTTGCTGGGAGCATTGATTCTTATAGCACGTGAAAGCAAGCTCAGCTCACAGAAACTTGGAAGTTTTATGGAGATGCTATTTGGTGGACGCTATGTACTTCTTTTGATGTCACTATTCTCAATCTATTGTGGATTAATCTACAATGAATTCTTTTCTGTTCCGTTTCACATATTTGGTGAGTCAGCTTACAGATGCCGAGATAATACATGCAGGGATGCACATACTATTGGCTTAGTCAAAGTCCGAGATCCATATCCATTTGGCGTGGATCCAAAGTGGCGTGGAAGTCGTTCAGAATTGGCTTTTCTGAACTCTATGAAGATGAAGATGTCCATTCTGCTTGGTGTGGTGCATATGAACTTGGGAATTATATTAAGTTATTTTAATGCTCGTTTCTTTGGAAAAACACTGGATATAAGGTACCAGTTTGTGCCGCAGATGATTTTCCTAAATAGTTTATTTGGGTATCTCTCCCTCCTCATTGTTATTGTATTATTGCTCTTGGCACTAATTGCGGCTCCATGGATGCTCTTTCCAAAACCCTTTATACTAAAGAAGCTTCATACCGAGAGATTTCAAGGTCGTGCTTATGGTATTCTTAATACCTCTGAGATGGATCTTGAGGAGCCAGATTCTGCCAGGCAACATCATCATGAAGAATTCAATTTCAGTGAGGTTTTTGTTCACCAAATGATCCACGCCATTGAGTTTATTCTAGGTTCAGTTTCAAATACAGCTTCGTATCTTCGACTTTGGGCACTAAGCTTGGCCCACTCCGAACTTTCTACTGTCTTCTATGAGAAAGTCCTGCTTCTAGCTTGGGGGTATGACAATCTTATCATTCGGTTACTGGGGCTAGCGGTGTTTGCCTTTGCAACTGCCTTTATACTGCTTATGATGGAGACTCTTAGTGCTTTTCTTCATGCCCTGCGGCTTCACTGGGTCGAATTTCAAAACAAATTCTACCATGGTGATGGCTACAAATTCAAGCCTTTTTCCTTTGCAACCTTAACAGATGACGATGAATGA 1062 0.4105 MFGDWGHGICLLLGALILIARESKLSSQKLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPFHIFGESAYRCRDNTCRDAHTIGLVKVRDPYPFGVDPKWRGSRSELAFLNSMKMKMSILLGVVHMNLGIILSYFNARFFGKTLDIRYQFVPQMIFLNSLFGYLSLLIVIVLLLLALIAAPWMLFPKPFILKKLHTERFQGRAYGILNTSEMDLEEPDSARQHHHEEFNFSEVFVHQMIHAIEFILGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLIIRLLGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFKPFSFATLTDDDE 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30741g00002 353 Pfam V-type ATPase 116kDa subunit family 174 345 IPR002490 GO:0033179|GO:0046961|GO:1902600
Stsc30741g00002 353 Pfam V-type ATPase 116kDa subunit family 1 174 IPR002490 GO:0033179|GO:0046961|GO:1902600
Stsc30741g00002 353 PANTHER VACUOLAR PROTON ATPASES 1 173 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30741g00002 Stsc-Chr30741 4761 7520 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30741g00002 1 346 Primary Pumps ATPases(2) AT2G28520 74.742 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30741g00002 K02154 - gmx:100776037 607.06