Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30733g00002 ATGAAATTTCCAATAATAGTAGTTCTTATCTTGTTGACACTATCAACAACAACATTGTCAAAAGCAGAACTTGATGCTAACTATTATGACAAAACATGTCCACAAATAGAAGACATAATTTCAGAGACGGTTCAGAGTGCTTCTAAGCAAGACCCTAAAATCCCAGCACGTATCTTGAGGATGTTCTTCCATGACTGTTTCATAAGGGGATGTGATGCATCAATATTGTTGGATTCAACTGACACAAACGAAGCTGAGAAAGATGGGCCTCCGAATCTTTCAGTTCACTCATTCTATGTGATTGATGATGCAAAAGCCAAGCTTGAGAAAGCTTGTCCTCACACTGTTTCTTGTGCTGATATAATCGCCATTGCGGCTAGAGATGTTGTAACCTTGTCTGGAGGTCCATTTTGGGAAGTTCTGAAAGGAAGAAAAGATGGAAGAATTTCAAAAGCATCGGACACCATAAACCTACCAGCGCCAACCTTGAATGTTACACAACTCATTCAAAGCTTCGCAAAGAGAGACTTATCAATAAAAGATTTGGTGACCTTATCTGGTGGCCACACTCTTGGATTCTCGCACTGTTCTTCATTCCAATCTCGCATACACAACTTCAGTTTATTGCATGACATTGATCCAACTTTGAACACTAACTTTGCCCTAGGGCTCAAGAACAAGTGCCCTAAACCTAATACCACAGATCCTAACGCTGGTCAGTTCCTTGATTCAACTGCTTCCGTGTTTGATAATGATTACTTTATACAAATTTTGGGAGGGAAAGGCTTGTTTTCTTCGGATCAATCGCTCGTGGGCGACTCGAGGACTAAATGGATCGTGGAAGCCTTTGCCAAAGATCAGAGTGTCTTCTTTAAGGAATTTGTGGATTCCATGTTGAAGCTCGGGAATGTAGGGGTGTTGGAGAATGGAGAAGTGAGACTCAATTGTAAGGTTGTGAATAATTGA 966 0.4079 MKFPIIVVLILLTLSTTTLSKAELDANYYDKTCPQIEDIISETVQSASKQDPKIPARILRMFFHDCFIRGCDASILLDSTDTNEAEKDGPPNLSVHSFYVIDDAKAKLEKACPHTVSCADIIAIAARDVVTLSGGPFWEVLKGRKDGRISKASDTINLPAPTLNVTQLIQSFAKRDLSIKDLVTLSGGHTLGFSHCSSFQSRIHNFSLLHDIDPTLNTNFALGLKNKCPKPNTTDPNAGQFLDSTASVFDNDYFIQILGGKGLFSSDQSLVGDSRTKWIVEAFAKDQSVFFKEFVDSMLKLGNVGVLENGEVRLNCKVVNN 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30733g00002 321 SUPERFAMILY Heme-dependent peroxidases 24 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc30733g00002 321 CDD secretory_peroxidase 23 319 IPR033905 GO:0004601|GO:0042744
Stsc30733g00002 321 Gene3D - 27 320 - -
Stsc30733g00002 321 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30733g00002 321 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30733g00002 321 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30733g00002 321 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30733g00002 321 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30733g00002 321 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30733g00002 321 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30733g00002 321 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30733g00002 321 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30733g00002 321 Pfam Peroxidase 42 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30733g00002 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Stsc30733g00002 321 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30733g00002 321 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30733g00002 321 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30733g00002 321 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30733g00002 321 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30733g00002 321 FunFam Peroxidase 159 301 - -
Stsc30733g00002 321 PANTHER PEROXIDASE 25-RELATED 12 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30733g00002 321 ProSiteProfiles Plant heme peroxidase family profile. 23 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30733g00002 321 Gene3D Peroxidase, domain 2 159 301 - -
Stsc30733g00002 321 FunFam Peroxidase 27 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30733g00002 Stsc-Chr30733 14781 16364 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30733g00002 5 320 Peroxidase AT5G51890 68.987 2.76e-169 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30733g00002 K00430 - gmx:100795422 501.901