Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30724g00004 ATGGAAGAAGCACAAGGCCAGTATTATTCTTCCACTCAGCAAGAATATGCATTACCTCATGATGGTGGAGGCAGGTCCCAGCTCAATGGCCAAGGGAATTGTGGGACTGGTATCATAGGCCTAAAGAAGAGAGGTCATGGAACTCGCTCTTGGATAAAAATTGATCAGGATGGGAATACTCAGACTGTAACGCTTGACAAGGCTACCATTATGAGACATTGTTCTTTACCTTCTAGAGATCTTCGACTATTGGATCCGATGTTCATTTATCCTTCTACCATATTAGGACGAGAAAAGGCTATTGTAGTAAACCTTGAGCAAATCCGTTGTATAATTACTGCTGATGAGGTCATCCTGATGAATTCATTGGATGGTAGTGTTGGTCAGTACAGGTCAGAATTATGCAATCGACTTCAGAAAGAAAAAGCTGATGATCTGCCTTTTGAGTTTAGAGCGCTGGAGATGGCTCTGGAGCTGACTTGTACATCTCTAGATGCTCAGGTAAAAGAGTTGGAAATGGAAATATATCCTGTTCTAGACGAACTAGCGTCGTCCATAAGTACGCTCAACTTAGAACGTGTTCGAAGATTTAAAGGTCATCTCCTTGCTTTGACTCAACGAGTTCAAAAGGTACGTGATGAAATAGAACATCTCATGGATGATGATGGTGATATGGCTGAGATGTGCCTTACTGAGAAAAGGAGAAGCTCAGATATGTACCCACTAAATGATTGCCTTAACACTCTTACGTCCAGTAGTGGTAAAGTGATTTCAAAGTCAGCTCCTAATTCACCAGAGCGCTCAATTAGTGGGATCCAGATGTTGCCAAGGGCTTTCAGCATCATTGGAAATTCAGGCAAACATGGTAGTTCAATGGGTTCATCTGATGATGGCGAAAGGATTCAGCCACTGGAAATGTTGCTTGAAGCATACTTTATCGTCATTGATAATACCCTTAACTCATTGTTGTCGCTTAAAGAATACATTGATGACACAGAAGATTTTATCAATATAAAGTTGGGAAACATTCAAAACCGCCTAATACAGTTTGAGTTGCTCCTTACTGCAGCTACATTGGTAGCGACAGTATTTGCTGCCGTGACAGCTGTGTTTGGGATGAACTTTGAAACCACAGTTTTTGATTATCCATCTGGTTTCCATTGGGTTTTGGTAGTTACCGGAATCACTTGTGCATCATTGTATTTCTCCTTCCTATTCTACTTTAAGTACAAGAAAGTGCTTCCGGGGTAA 1251 0.4125 MEEAQGQYYSSTQQEYALPHDGGGRSQLNGQGNCGTGIIGLKKRGHGTRSWIKIDQDGNTQTVTLDKATIMRHCSLPSRDLRLLDPMFIYPSTILGREKAIVVNLEQIRCIITADEVILMNSLDGSVGQYRSELCNRLQKEKADDLPFEFRALEMALELTCTSLDAQVKELEMEIYPVLDELASSISTLNLERVRRFKGHLLALTQRVQKVRDEIEHLMDDDGDMAEMCLTEKRRSSDMYPLNDCLNTLTSSSGKVISKSAPNSPERSISGIQMLPRAFSIIGNSGKHGSSMGSSDDGERIQPLEMLLEAYFIVIDNTLNSLLSLKEYIDDTEDFINIKLGNIQNRLIQFELLLTAATLVATVFAAVTAVFGMNFETTVFDYPSGFHWVLVVTGITCASLYFSFLFYFKYKKVLPG 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30724g00004 416 CDD Mrs2_Mfm1p-like 51 413 IPR039204 -
Stsc30724g00004 416 Gene3D Magnesium transport protein CorA, transmembrane region 354 413 - -
Stsc30724g00004 416 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 353 405 IPR045863 -
Stsc30724g00004 416 Gene3D Magnesium transport protein CorA, transmembrane region 126 347 - -
Stsc30724g00004 416 Gene3D - 40 122 - -
Stsc30724g00004 416 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 23 414 IPR039204 -
Stsc30724g00004 416 Coils Coil 201 221 - -
Stsc30724g00004 416 FunFam Magnesium transporter MRS2-1 39 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30724g00004 Stsc-Chr30724 29208 34903 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30724g00004 1 415 MRS2 Gene Family AT2G03620 63.121 4.29e-174 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30724g00004 K16075 - gmx:100803935 672.159