Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30717g00004 ATGAAAGGTGCATACCCTTCAAATGTTGATTCTTCTGAATGTGTCTTTGGTCCACAAGGTGTGTACTACCAGCAACTTGACTTTGCCAGTGTCTTGAACTGCCAAAGAAGGCCAACCATAGTTGATCTCCCTCCAACAAGGTTCAATGACACAGAACTTGGAAAAGTCCCATTTTGCTGCAGAAATGGTACATTATTGCCACCTACAATGGATCCCAGTAAGTCCAAGTCAAAGTTCCAAATGCAGGTTTACAAGATGCCTCCCAAAATCAATCGATCCGAGCTCGCGCCACCTAGGAGCTGGAAGATAAGTGGTGCAGAACTCAACCCTGAATACCAATGTGGGAATCCTGTTAGGGTGAGTCCTAGTGAGTCTCCAGATCCAACAGGGTTACCATCAAACACATCTGCAATTGCAAGTTGGCAAATTGTCTGCAACATAACAAGGGACACATCAAGGAAAAGCAAATGTTGTGTCTCATTTTCATCTTTCTTCAATGAATCTGTTGTTCCTTGCCAGACATGTGCTTGTGGTTGCCCTGCAAAGCCAGAGAGGACTTGCAGTGTGGCTGAGCAAGCTTTGCTACTTCCTCCAGAGGCACTTCTTGTTCCATTTGAGAATAGAACTAAAAAGGCTCTTACTTGGGCTGATAGAAAGCATCTATCAGTGCCTAATCCTATGCCTTGTGGTGATAACTGTGGTGTGAGCATCAACTGGCATGTGAGTACAGATTACAGGCGAGGTTGGACTGCGAGGATCACGCTTTTCAACTGGGGCGAAACTGATTTTGCAGACTGGTTTGTGGCTGTGGAAATGGATAAAGCAGCTCCTGGCTTTGAGAAAATGTACTCATTCAATGCTAGTTCATTAGACAGTGTGAAGAACACAATATTCATGCAAGGATTGGAAGGATTGAACTTCCTTGTAGCCGAAGCAAATGGATCTAACCCGAGGAAAGATCCTAAGGTTCCAGGAAAACAACAATCTGTGATCTCATTTAGAAAGAAAGCTACTCCTGGAATCAAAGTGGTAGATAGTGATGGATTTCCCAGTAAAGTGTTCTTTAATGGGGAGGAATGTTCTCTTCCTTTGGTATATCCAAGCAGTGGTTTCAGGAATGAGTTTTCTTTTGTTTTAATGATGTTCCTAATGTTGTTCCCAATCATATGGATGTGGTGA 1179 0.4334 MKGAYPSNVDSSECVFGPQGVYYQQLDFASVLNCQRRPTIVDLPPTRFNDTELGKVPFCCRNGTLLPPTMDPSKSKSKFQMQVYKMPPKINRSELAPPRSWKISGAELNPEYQCGNPVRVSPSESPDPTGLPSNTSAIASWQIVCNITRDTSRKSKCCVSFSSFFNESVVPCQTCACGCPAKPERTCSVAEQALLLPPEALLVPFENRTKKALTWADRKHLSVPNPMPCGDNCGVSINWHVSTDYRRGWTARITLFNWGETDFADWFVAVEMDKAAPGFEKMYSFNASSLDSVKNTIFMQGLEGLNFLVAEANGSNPRKDPKVPGKQQSVISFRKKATPGIKVVDSDGFPSKVFFNGEECSLPLVYPSSGFRNEFSFVLMMFLMLFPIIWMW 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30717g00004 392 PANTHER COBRA-LIKE PROTEIN 7 1 385 - -
Stsc30717g00004 392 Pfam COBRA-like protein 1 148 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30717g00004 Stsc-Chr30717 22940 24425 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30717g00004 1 376 COBRA Gene Family AT4G16120 66.142 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30717g00004 - - vum:124836920 612.453