Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30698g00002 ATGGCGGCAAAGATCTCTTCGTCCACCAGTCTTCCATCATATCCGACGGTTACCACACTTTCCACAAAGTCGATCGCGTCTAATACTCCATCGCCGTCGCGACAATCACAAGACAAAGGCCCCGGAGATGAAATTCCAGTGACTTTAGATGAAAAGCCTGAAATACCTCATGGGCCAAGTAGAAGTAGTACAAGAATATCATCGTCTAATGTTGATCATCATCATAAGTTAAAGTCTTCTCCAGGAAGCAAACATTCTATCAAATCTCGCTTAAAATCCCTCATTCAAGACGAATTATACAGAAAGAAGGGTGAACATAAGAGAAGCTCAACATGCCCAACATCAAAGTCACAACTCATTCGTGCAGATTCGGTTCATCACTTGGATGTAACAAGCGACAACAACCAAAAATGTGTTGATTGTGGTGCTGAGTTTTCTCATGACAATGTGGAAATGAGTAACATTCATAAGCATGTGTGTTCTCCTCATCAATCTCATCAAGGTGCTCGAAACCAAAAGATTAAGTCAATGAATGCAAAGATTCTTACAACCGATGCTTCACCTCATCTCTTCAAGGATTTTCTAGATGCTTTGGATTTGATGAGCAAAAACAAGGACTCTATTTTGAAATATATACAGGATCCTGAAGGATCCACTCTAATTCCATCTGGAGAAAATGATAAACAAGATTCTAGAAGCAATAAACCGTCGAAACGATCGAATTCTGTGTCGTTTCCTCTGCCAGATTCTTCGTCATCTAAGGATTCTAAGAAGAAGCCTTTAAAGATGGATGAGAAGGTTGAGAGACAATTACAAGCAGAAAATAATAGGAGAAACAAATCCATGTCTAAATCATCATCAGAAACGTCGCCGCAGCATTCGCCGCCGGATGTCCCTAGCAAGGCGAAATCCAAGAGATATTTCTTTGATCTCAAGAAGAAGATCATGCAGATAATCGAAGAGAACAAGAAAGAGAAGCATCGCATCGCAATGGATGCTATAGTGGACAAAATCCCTCAGGGAAATAAGCATTCAAAGCTTTCAAAGAAGTATACACATGACCCGTTATCGAAAGATCCCGCCGCTACTGACATTGAAGGGAAAGAATCTAGCACGAAGGGTGGTGGTTATGGCCGGTGTCTCTCGTCTTCTTCCTTTAACAAACGCCAACCATCTACAATTAGAACTGCATCTCTAAAAGAATCAGCTGGGAAATATTCTCAGCTGTATGAGACTTGTTTTAACACTGATTCTAAGGCTAATGAGAATATAAAGTTGAAGGAAGAAGAGAAAAGTTCTTGTGTGCTAATGAGCCAGAATACCTTTCAAAGGTTTCTTTCTTTACCTCATAACATTGCAGTCAATAGTGAAGATTCTTCTCTGTTTCTCTCTTTCCAGAGCTCTTTTCGGCAGCGCAACCGCGAAAGCCTTTTAAGGAGTTTCAAAAAGGCTTGTGATTCGAACAGCGAAGCCTTGCTACAAGCTCTAGAAGACGATGCGATTCAAGAAAGCATCTTGAGTGCTCTTGAACCAAAGAGAACTCTTGTAAGGAGTCAATCAAGATCAGAAGCAGATGCTAATAATGTTAGTGATTGTGCTTCTTGCTCTGATGAAATGGTTACTGGACATGGAACAGAATCTAATCAAATGCTGGGAGAAGCAAACTCGGTGTTCTCTTGTGACACCAATTTCTTGGAAGACACATTTGAGTTTGATAACTTAAACCTATTGGATGGTGAGCTATTTTTCGACACAGAATTGGATCAGAAAGATGAAGTTGGGAGAGGAGATAACACTCAAAAACTCAAAACTATAAGTAAGAATTCCAGCTACTACAAAATCCCATGTATTGAAGTTGATCCAAGCCATGAATCTGCATTCAATTATGTGAGGAAGGTGTTGGAGCTCTCTGGTTTCACTAGCAGCTCTGATGAATCTCTTGAAATGTGGTATTCAGATAGCCAACCAGTTAATCCTTCAGTTTATGAAGAACTTGAAGGGTGCTTGCTTCTTGATCCTGCTGCTGATTGTGATGATGGACATTATTATTGTAACCACTTACTCTTGTTTGACATAGTCAATGAAGGGTTGTTGGATATCTTTGGAAGATCATATAGCTATTATCCAAGATCATTGTCTTCACTCTCACATGTTCATCCATTGCCAGTAGGAGAAGATGTTGTGAGAAAAGTTTGGGCACTTCTTAGTTGGTACCTGAGATCAACATCTGAGCCTTACCCAACATTGGATTACTATGTGAGTAGAGATCTTGCAAAAGATGATGGGTGGATGAATCTCCAATTTGATTCTGAATGTGTGGCCCTTGAGTTAGATGATTTGATTTTTGATGATCTACTAGAGGAAATTATCAAAATTTAA 2379 0.3981 MAAKISSSTSLPSYPTVTTLSTKSIASNTPSPSRQSQDKGPGDEIPVTLDEKPEIPHGPSRSSTRISSSNVDHHHKLKSSPGSKHSIKSRLKSLIQDELYRKKGEHKRSSTCPTSKSQLIRADSVHHLDVTSDNNQKCVDCGAEFSHDNVEMSNIHKHVCSPHQSHQGARNQKIKSMNAKILTTDASPHLFKDFLDALDLMSKNKDSILKYIQDPEGSTLIPSGENDKQDSRSNKPSKRSNSVSFPLPDSSSSKDSKKKPLKMDEKVERQLQAENNRRNKSMSKSSSETSPQHSPPDVPSKAKSKRYFFDLKKKIMQIIEENKKEKHRIAMDAIVDKIPQGNKHSKLSKKYTHDPLSKDPAATDIEGKESSTKGGGYGRCLSSSSFNKRQPSTIRTASLKESAGKYSQLYETCFNTDSKANENIKLKEEEKSSCVLMSQNTFQRFLSLPHNIAVNSEDSSLFLSFQSSFRQRNRESLLRSFKKACDSNSEALLQALEDDAIQESILSALEPKRTLVRSQSRSEADANNVSDCASCSDEMVTGHGTESNQMLGEANSVFSCDTNFLEDTFEFDNLNLLDGELFFDTELDQKDEVGRGDNTQKLKTISKNSSYYKIPCIEVDPSHESAFNYVRKVLELSGFTSSSDESLEMWYSDSQPVNPSVYEELEGCLLLDPAADCDDGHYYCNHLLLFDIVNEGLLDIFGRSYSYYPRSLSSLSHVHPLPVGEDVVRKVWALLSWYLRSTSEPYPTLDYYVSRDLAKDDGWMNLQFDSECVALELDDLIFDDLLEEIIKI 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30698g00002 792 MobiDBLite consensus disorder prediction 236 251 - -
Stsc30698g00002 792 MobiDBLite consensus disorder prediction 276 297 - -
Stsc30698g00002 792 MobiDBLite consensus disorder prediction 347 366 - -
Stsc30698g00002 792 MobiDBLite consensus disorder prediction 1 38 - -
Stsc30698g00002 792 MobiDBLite consensus disorder prediction 341 388 - -
Stsc30698g00002 792 MobiDBLite consensus disorder prediction 252 275 - -
Stsc30698g00002 792 MobiDBLite consensus disorder prediction 216 304 - -
Stsc30698g00002 792 MobiDBLite consensus disorder prediction 44 58 - -
Stsc30698g00002 792 MobiDBLite consensus disorder prediction 1 89 - -
Stsc30698g00002 792 PANTHER PROTEIN TRM32 72 790 IPR044257 -
Stsc30698g00002 792 Pfam Domain of unknown function (DUF4378) 627 788 IPR025486 -
Stsc30698g00002 792 Pfam Protein of unknown function (DUF3741) 175 215 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30698g00002 Stsc-Chr30698 7030 11674 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30698g00002 616 782 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 49.143 2.44e-48 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30698g00002 - - aip:107610961 847.81