Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30697g00001 ATGGAGAAAAGGGGGAATGTTTTGATGCAGAAGTATGAATTTGGAAGGCTATTAGGCCAAGGAAACTTTGCAAAGGTTTACCATGCAAGGGACCTCAATACCGGTGACAGCGTCGCCATTAAGGTGATCGACAAGGAGAAAATCCTGAAGGTTGGGATGATGGATCAAACCAAGAAAGAGATATCTATTATGAGACTGGTTAAGCACCCCAATGTGTTGCGGCTCTATGAGGTCTTAGCCACCAAAACCAAGATTTACTTCATCATAGAATATGCAAAAGGGGGTGAACTATTCAACAAGGTAGCTAGAGGTAAACTACATGAGGACATGGCAAGGAAGTACTTTCAACAACTCATCAACGCCGTCGATTTTTGCCACAGAAGGGGTGTTTATCACAGGGATTTGAAGCCGGAAAACTTGCTCTTGGATGATAATGGTGTTCTCAAGGTAGCAGATTTCGGACTGAGTGCACTGGTTGAGGCTCATAGCCAAGGCAACATGCTGCAAACCGTCTGTGGAACACCTGCATATGTTGCGCCGGAGGTTATAAGTCGAAAGGGTTATGATGGAGCAAAAGCTGATGTTTGGTCTTGTGGAGTGATCTTATATGTTCTCTTGGCTGGTCATTTGCCATTCTATGATTTGAATCTTATGGCACTTTATAGGAAAATTACCAAAGCAGAGTACAAATCTCCGAACTGGTTTTCATTCGAAGCACGCAGACTATTAGCAAGGATCCTTGACCCCAACCCAAAAACAAGGATATCCACAGAAAAAGTTATGGAAAGTTCTTGGTTCAGAAAGGGACTCAATTCGAGATCAGATCAAAAGCAGAGAGAGGCTCCAGATTTAGCTTTACCTGATTCTGATAAAGCTATTGGCCTCTATGACAGTGGAAGTTCTTCTGCAGAGGCAAATCAAGCATTGGTTAACTATAACTTAAATGCTTTTGATATAATTTCTCTTTCTGCTGGGCTTGACTTGTCTGGCCTTTTCGCAAGCAATGATGAACAGGATGGTGTAATGAAATTTACATCCATGAACTCTGCCTCGTTGATCATTTCCACGATGGAGAATATCGCTTGCATTCTGGGGCTGAAGATAGCTAAGAAGGATGGAGGCCTGTTGAGACTAGAGAGATCAAGGGAACGCAAGAAAGGGCAACTTTCAATTGATGTCGAAATATTCGAGTTTTCCCCCTCTTTCCATCTGGTTGAAATCAAGAGATCATGTGGTGATACAATAGAATACCAGAAGATATTGAAGGAAGATATAAAACCAGCTTTGAAAGATATTGTCTCAGTTTGGCAAGGTGAGCAGCAACAGCAATAA 1332 0.4219 MEKRGNVLMQKYEFGRLLGQGNFAKVYHARDLNTGDSVAIKVIDKEKILKVGMMDQTKKEISIMRLVKHPNVLRLYEVLATKTKIYFIIEYAKGGELFNKVARGKLHEDMARKYFQQLINAVDFCHRRGVYHRDLKPENLLLDDNGVLKVADFGLSALVEAHSQGNMLQTVCGTPAYVAPEVISRKGYDGAKADVWSCGVILYVLLAGHLPFYDLNLMALYRKITKAEYKSPNWFSFEARRLLARILDPNPKTRISTEKVMESSWFRKGLNSRSDQKQREAPDLALPDSDKAIGLYDSGSSSAEANQALVNYNLNAFDIISLSAGLDLSGLFASNDEQDGVMKFTSMNSASLIISTMENIACILGLKIAKKDGGLLRLERSRERKKGQLSIDVEIFEFSPSFHLVEIKRSCGDTIEYQKILKEDIKPALKDIVSVWQGEQQQQ 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30697g00001 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Stsc30697g00001 443 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30697g00001 443 FunFam Non-specific serine/threonine protein kinase 310 436 - -
Stsc30697g00001 443 Pfam NAF domain 313 370 IPR004041 GO:0007165
Stsc30697g00001 443 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Stsc30697g00001 443 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165
Stsc30697g00001 443 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 430 - -
Stsc30697g00001 443 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Stsc30697g00001 443 Gene3D Kinase associated domain 1, KA1 315 434 - -
Stsc30697g00001 443 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30697g00001 443 FunFam Non-specific serine/threonine protein kinase 6 307 - -
Stsc30697g00001 443 Gene3D Transferase(Phosphotransferase) domain 1 3 314 - -
Stsc30697g00001 443 SUPERFAMILY Protein kinase-like (PK-like) 8 307 IPR011009 -
Stsc30697g00001 443 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30697g00001 443 CDD CIPK_C 315 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30697g00001 Stsc-Chr30697 2556 4667 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30697g00001 1 442 CBL-interacting serine-threonine protein kinases AT5G58380 57.895 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Stsc30697g00001 Pkinase 3.4e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30697g00001 K07198 - gmx:100816254 667.151