Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30696g00003 ATGGGTTCGAAACCGTGGCTCTACCCTGCTCCTACGTATCGGGCAATAGAGACGTTTTGGGACACCGATGAAGACGCGCCGGGGCCACGATGCGGCCACACACTCACCGCCGTTGCCGCCACCAAGTCGCACGGACCAAGGCTCATCCTTTTCGGCGGTGCCACCGCCATCGAGGGAGGATCTTCCTCAGCTCCCGGAATCAGGTTAGCTGGAGTTACCAATTCGGTTCATTCGTATGATGTTCTAACGAGAAAATGGACTAGTCTTAAGCCTGCCGGAGAGCCGCCATCCCCTCGGGCAGCTCATGCCGCCGCTGCGGTTGGGACTATGGTTGTTTTTCAGGGTGGCATAGGTCCTGCTGGGCATTCCACTGATGATCTCTATGTGCTTGACATGACCAATGATAAATTCAAATGGCATAGAGTTGTTGTACAAGGGCAAGGGCCCGGTCCTCGCTATGGCCATGTAATGGATTTGGTTGCACAGAGATATCTCGTTACAGTCAGTGGAAATGATGGTAAAAGAGTTGTTTCTGATGCATGGGCTTTGGATACTGCGCAAAAACCTTACATGTGGCAAAAACTGAACCCAGAAGGTGATAGACCTTCTGCGAGAATGTATGCTACTGCTAGTGCTCGTTCAGATGGAATGTTTTTACTTTGTGGTGGAAGAGATTCTTCTGGGACGCCACTAGCAGATGCGTATGGACTGCTCATGCATAGGAACGGTCAGTGGGAATGGACACTTGCGCCTGGAGTTTCCCCTTCACCGAGGTATCAACATGCTGCGGTTTTTGTTGGTGCACGATTGCACGTTACAGGAGGGGTTCTCAAAGGTGGACGGGCTGTAGAAGGTGAAGCAGCCATTGCAGTACTTGACACTGCTGCTGGGGTTTGGTTGGATAGAAATGGCATTGTGGCCTCGTCACGTCCAAATAAAGGTCATGATTATGATCCTCATTTGGATCTTTTGCGTCGTTGTCGCCATGCAGCAGCGGCTGTTGGTGTTCGTATATACATCTATGGTGGTCTTAGAGGAGATACTCTACTAGATGATTTATTAGTGGCAGAAAACTCACCCTTTCAGTCTGACAGTAATTCTCCTGCGTTAACATCTGAGAGAACTTCACCTATTGCAAGCCCTAAATTCGGCCAGTCTAACGTAAATTATAATATAGCACCACGAAGTTCAGATTCTGGACCAGATGTTCCCTCATCTGGTGGCTTAGTAATGGACAGAAACTCCATGGAGAAACTTAGGGAAGCATCAGCTGCAGAAGCTGAGGTAGCAAATGCAGTCTGGCAAGCTGTGCAGGCATCAAATAGTCCTGCTGAAGAAACATTGCTGTCAGATGACAACTCACATGCCGCAGAAACAGTTTCAGATGGCAGTGACACAGAAGGCGATGTTCGCCTTCATCCCAGAGCTGTTGTAGTCGCTAAAGAGGCCGTAGGTAACCTAGGTGGAATGGTGAGACAGCTATCCTTGGATCAATTTGAAAATGAAAGCAGACGCATGGTTCCTGTAAATAATGATACACCATATCCTACCAAAAAATTCACTAGGCAGAAATCCCCTCAGGGATTACATAAAAAGATAATTTCGAATTTGCTTAGGCCACGTAACTGGAAAGCACCTGCAAACAGACGATTCTTCTTGGATTCTTATGAAGTTGGTGAATTATGCTATGCTGCCGAGCAGATATTTATGCAAGAACCAACTGTTCTTCAGTTAAAAGCTCCCGTCAAAGTATTTGGGGATCTTCATGGTCAGTTTGGTGATTTGATGCGACTATTTGATGAATATGGATTCCCTTCAACTGCAGGAGACATCACGTATATTGACTACCTGTTTTTGGGAGATTATGTCGATAGAGGACAGCACAGCTTGGAAACCATTACCTTGCTGCTTGCACTTAAGATTGAGTATCCTGAGAATGTTCACTTGATACGTGGTAACCATGAAGCTGCTGACATAAATGCACTATTTGGTTTTCGTATTGAGTGTATCGAAAGGATGGGAGAAAATGATGGAATCTGGGCATGGACGAGGTTCAATCAACTTTTCAACTATCTTCCGCTTGCTGCTCTTATTGAAAAGAAAATTATCTGTATGCATGGTGGCATTGGAAGGTCGATCAATTCTGTAGAACAGATAGAGAGGCTTGAAAGGCCCATAACAATGGATGCAGGATCTATTATTTTAATGGACCTTCTGTGGTCTGATCCGACTGAAAATGATAGTGTAGAGGGTTTGAGACCAAATGCCAGAGGACCAGGTCTTGTTACTTTTGGGCCTGACCGTGTAACCGAGTTCTGCAAGAAAAATAAACTACAGCTAATTATAAGGGCCCATGAATGCGTCATGGATGGCTTTGAACGATTCGCACAGGGACAATTGATTACACTTTTCTCGGCAACTAACTATTGTGGAACGGCAAACAATGCTGGTGCCATACTGGTCGTTGGCCGGGGCTTGGTAGTGGTTCCAAAATTGATCCACCCCCTTCCACCACCCCTTCAATCTCCGGAGACATCTCCGGAGCGTGTCATGGATGAGACATGGATGCAGGAACTTAATATTCAGAGGCCACCAACTCCAACACGCGGTCGACCGCAGCCGGAACTTGACCGCGGCTCACTAGCATACATATGA 2655 0.4689 MGSKPWLYPAPTYRAIETFWDTDEDAPGPRCGHTLTAVAATKSHGPRLILFGGATAIEGGSSSAPGIRLAGVTNSVHSYDVLTRKWTSLKPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDMTNDKFKWHRVVVQGQGPGPRYGHVMDLVAQRYLVTVSGNDGKRVVSDAWALDTAQKPYMWQKLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGTPLADAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLKGGRAVEGEAAIAVLDTAAGVWLDRNGIVASSRPNKGHDYDPHLDLLRRCRHAAAAVGVRIYIYGGLRGDTLLDDLLVAENSPFQSDSNSPALTSERTSPIASPKFGQSNVNYNIAPRSSDSGPDVPSSGGLVMDRNSMEKLREASAAEAEVANAVWQAVQASNSPAEETLLSDDNSHAAETVSDGSDTEGDVRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMVPVNNDTPYPTKKFTRQKSPQGLHKKIISNLLRPRNWKAPANRRFFLDSYEVGELCYAAEQIFMQEPTVLQLKAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRSINSVEQIERLERPITMDAGSIILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTEFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPPLQSPETSPERVMDETWMQELNIQRPPTPTRGRPQPELDRGSLAYI 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30696g00003 884 PIRSF STPPP_BSU1 1 884 IPR012391 GO:0004721|GO:0009742
Stsc30696g00003 884 Pfam Serine-threonine protein phosphatase N-terminal domain 532 579 IPR031675 -
Stsc30696g00003 884 FunFam Serine/threonine-protein phosphatase 9 192 - -
Stsc30696g00003 884 MobiDBLite consensus disorder prediction 443 469 - -
Stsc30696g00003 884 FunFam Serine/threonine-protein phosphatase 518 857 - -
Stsc30696g00003 884 Pfam Kelch motif 96 133 - -
Stsc30696g00003 884 Gene3D - 195 378 IPR015915 GO:0005515
Stsc30696g00003 884 SUPERFAMILY Kelch motif 70 356 IPR015915 GO:0005515
Stsc30696g00003 884 SUPERFAMILY Metallo-dependent phosphatases 535 845 IPR029052 -
Stsc30696g00003 884 PRINTS Serine/threonine phosphatase family signature 799 815 IPR006186 GO:0016787
Stsc30696g00003 884 PRINTS Serine/threonine phosphatase family signature 687 713 IPR006186 GO:0016787
Stsc30696g00003 884 PRINTS Serine/threonine phosphatase family signature 717 744 IPR006186 GO:0016787
Stsc30696g00003 884 PRINTS Serine/threonine phosphatase family signature 616 643 IPR006186 GO:0016787
Stsc30696g00003 884 PRINTS Serine/threonine phosphatase family signature 777 797 IPR006186 GO:0016787
Stsc30696g00003 884 PRINTS Serine/threonine phosphatase family signature 581 608 IPR006186 GO:0016787
Stsc30696g00003 884 PRINTS Serine/threonine phosphatase family signature 649 673 IPR006186 GO:0016787
Stsc30696g00003 884 MobiDBLite consensus disorder prediction 443 461 - -
Stsc30696g00003 884 Gene3D - 509 855 IPR029052 -
Stsc30696g00003 884 CDD MPP_Bsu1_C 533 835 IPR041758 -
Stsc30696g00003 884 MobiDBLite consensus disorder prediction 360 403 - -
Stsc30696g00003 884 Gene3D - 10 194 IPR015915 GO:0005515
Stsc30696g00003 884 ProSitePatterns Serine/threonine specific protein phosphatases signature. 650 655 IPR006186 GO:0016787
Stsc30696g00003 884 MobiDBLite consensus disorder prediction 360 410 - -
Stsc30696g00003 884 Pfam Calcineurin-like phosphoesterase 581 788 IPR004843 GO:0016787
Stsc30696g00003 884 SMART pp2a_7 553 839 IPR006186 GO:0016787
Stsc30696g00003 884 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 8 884 - -
Stsc30696g00003 884 MobiDBLite consensus disorder prediction 860 884 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30696g00003 Stsc-Chr30696 16975 23918 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30696g00003 561 780 Calmodulin-binding Proteins AT5G63870 30.859 6.67e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30696g00003 K01090 - gmx:100805538 1619.75