Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30696g00002 ATGAAGATCACATTTTTTCTAGTAGCTTGCTTTTTGGTGCTTTTGGGTCTCATTGGGGATTGTAATGGTGGCAGCTTAGTCAAGAACTTCTACAGAAATTCATGCCCTCAAGCTGAGAACATTGGTTGTGATGGGTCAGTTTTGTTGAACTCTACTGATACTAATACTGCAGAGAAAGATGCAATCCCTAATTTATCATTGGCTGGTTTTGATGTAATTGATGACATAAAATCCGCACTTGAAGAAAAATGTCCCAAAACAGTCTCATGTGCTGATATATTGGCATTAGCAACCAGAGATGCTGTTTCATTTCAATTTAATAAGCCTATGTGGCAAGTTCTAACTGGTAGAAGAGATGGCATAATATCCAAAAGTAGTGAAGTATTGGACAATATTCCATCACCTTTCTCCAACTTAACCATTCTCAAACAAAACTTTGCCAATAAAGGTCTCGCATTGCATGACCTCGTTGTATTATCAGGAGCACACACAGTTGGAGTGACACATTGCAACTTATTCAGTGAAAGGCTTTATAACTTCACTGGAAAAGGTGATCAAGATCCTTCATTGGACCCTACTTATGCTGAATTCTTGAAGACCAAATGCCAGAGCCTGGATGATGACACAACGGAAGTGGAAATGGATCCTAATAGCTCCACCAATTTTGATAGTAACTATTATCCTAACCTTCTGCAGAACAAGGGTATCTTCACTTCAGATTCTGCACTTCTAACAACTGGCCAATCAGCAGATATTGTTAAAGAACTTGTTGATCAACAAAAGTTCTTCACTGAGTTTGCACAATCCATGCAAAAAATGGGAGCTATTCAGGTCCTTTCAGGCTCAGATGGGGAGATTAGGATCAATTGTTCACTTGTCAACTCATAA 888 0.3885 MKITFFLVACFLVLLGLIGDCNGGSLVKNFYRNSCPQAENIGCDGSVLLNSTDTNTAEKDAIPNLSLAGFDVIDDIKSALEEKCPKTVSCADILALATRDAVSFQFNKPMWQVLTGRRDGIISKSSEVLDNIPSPFSNLTILKQNFANKGLALHDLVVLSGAHTVGVTHCNLFSERLYNFTGKGDQDPSLDPTYAEFLKTKCQSLDDDTTEVEMDPNSSTNFDSNYYPNLLQNKGIFTSDSALLTTGQSADIVKELVDQQKFFTEFAQSMQKMGAIQVLSGSDGEIRINCSLVNS 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30696g00002 295 Pfam Peroxidase 41 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30696g00002 295 FunFam Peroxidase 133 273 - -
Stsc30696g00002 295 PRINTS Plant peroxidase signature 107 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30696g00002 295 PRINTS Plant peroxidase signature 268 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30696g00002 295 PRINTS Plant peroxidase signature 229 246 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30696g00002 295 PRINTS Plant peroxidase signature 213 228 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30696g00002 295 PRINTS Plant peroxidase signature 87 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30696g00002 295 PRINTS Plant peroxidase signature 29 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30696g00002 295 PRINTS Plant peroxidase signature 154 166 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30696g00002 295 PRINTS Plant peroxidase signature 68 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30696g00002 295 ProSitePatterns Peroxidases proximal heme-ligand signature. 155 165 IPR019793 -
Stsc30696g00002 295 ProSiteProfiles Plant heme peroxidase family profile. 42 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30696g00002 295 Gene3D Peroxidase, domain 2 133 273 - -
Stsc30696g00002 295 SUPERFAMILY Heme-dependent peroxidases 26 294 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc30696g00002 295 CDD secretory_peroxidase 26 293 IPR033905 GO:0004601|GO:0042744
Stsc30696g00002 295 PANTHER PEROXIDASE 25-RELATED 42 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30696g00002 295 FunFam Peroxidase 41 149 - -
Stsc30696g00002 295 Gene3D - 42 294 - -
Stsc30696g00002 295 PRINTS Haem peroxidase superfamily signature 88 105 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30696g00002 295 PRINTS Haem peroxidase superfamily signature 215 230 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30696g00002 295 PRINTS Haem peroxidase superfamily signature 107 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30696g00002 295 PRINTS Haem peroxidase superfamily signature 155 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30696g00002 Stsc-Chr30696 4777 6525 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30696g00002 1 295 Peroxidase AT1G05260 49.695 3.45e-99 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30696g00002 K00430 - gmx:100799691 438.343