Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30686g00005 ATGTTCTGTGGTCGGTTTTCGAAGACTGGCCAAGGTAGAAAAAATGATGAGAGGCCACTTCTAAGCTTGAGCATGAGTGACAACTCCGTTGGTCCTTCCAGTTACGGATTTGGAAATTCAACAACTGGAGAGAAACTTGGGTTCCAATCATCAAGTAATAATTTGTTTGGCAACAAGAAGCCTCAAGTTCAAAATAGTCAATCAATAGGAACTTTTAGTGCTGCTTCAGGATCACCATTTGAAGTAAAAGCTCATTCCCAGTGGACAGGAACCATGCCTTCTGGAATGCCTCCTTTAAAACCTCCACCTGGTAGGCTGAATCCTCTCCCCCCGGAGCCTCCTTCATTTAGGCCTTCTGGTAATTCTGCTGCTGCTACTGCCCCTGCCCCGGCTACTCATGGTCCACAAAAGCTTGGTGCTGGTGGTGCTCCACGTCCTGGCCCACACCCAGCACCAGTTGGTGCCAAACATTCTCCTCCCCTGCCACCACCCCCAGCGTTGGCTGCTGCCAGAGCTCATCCTCCACCACCACCACCAGTTGGGGCCAGACCTAGTCCTCCACCACCACCACCTCCCGCATCAACAGGTGAGAAACCTAGTCCTCCCCCACCACCCCCAGCTCCAGCTGGTGCCAAACCTGGTCCTCCTCCACCACCCCCAGCTCCAGCTGGTGCCAAACCTGGTCCTCCGCTGCCACCTCCTAAGGGTGGTATACCTCCTCCTCGCCCACCTCCTCCAATTGGGTCTAGCAAACATAAAGCTACAGAGAATATTGAAGCTGGCGCAAGTGAAGCTGATGCTCCTAAAGCCAAGCTAAAGCCGTTTTTCTGGGATAAGGTTCAAGCTAACTCTGATCAATCAATGGTTTGGAATCAGATCAAGTCTGGATCATTCCAGTTTAATGAGGAGATGATAGAAACACTTTTTGGCTATAACACTGCGGATAAAAACAATGGTCAACGAGGGAAAGTGTCTTCCTCCCAAGAGCCCTCACCTCAGTATATCCAGATCATTGACAAAAAGAAAGCACAAAATCTATTAATTCTGTTGCGAGCCTTGAATGTGACAATGGAAGAAGTATGTGATGCACTTTACGGAGGAAATGAGCTACCTGCTGAGTTCCTCCAAACCTTGCTCAAGATGGCACCGACGACTGATGAACAACTTAAGCTTAGACTTTTTACTGGAGAGCTATCTCAACTTGGCCCCGCTGATCAGTTCTTGAAAGCCATGGTTGACATTCCATTTGCTTTTAAGCGAATGGAAGCACTTCTTTTCATAAGTACACTTAAAGAGGATCTCAATTCTACTATCGAGTCTTTTGCAGTTCTAGAGGTTGCTTGTAAGGAACTGAAAAACAGCCGGCTGTTCCTCAAGCTTCTTGAAGCTGTTCTCAAAACTGGCAACCGTATGAATGATGGAACATTCCGTGGTGGTGCACAAGCGTTTAAGCTTGATACACTCCTGAAACTATCCGATGTAAAAGGAACAGATGGCAAGACCACACTCTTACACTTTGTAGTCCAAGAAATTATCCGCTCTGAAGGCATAAAAGCTGCCCGGTTGGCAAAAGAGAGCGACCCCAAAGATAGCCCTAGTGAAACCGAAGATCACTACCGTGAAATAGGTCTTCAGGTGGTCTCGCACTTGAGTAGTGAACTTGAGAATGTCAAGAGAGCAGCAATTCTAGACGCCGACACCTTAACTGGAACTACTGCCAAACTTGGCCATGGTCTCATGCAAACCAAAGATTTGTTAAACAAAGATCTGAAGAATGTAGAGGAAGATAGAGGGTTTAGTGACACAGTGAGACATTTCGTGCAGAATGCAGAGACTGATGTCGTGAGACTTCTGGAAGAAGAGAAGAGAGTCATGGCTCTGGTAAAGAGCACTGGTGATTACTTTCATGGGAAGGCTGGCAAGGACGAAGGCCTACGGTTGTTTGTAATAGTAAGAGACTTCTTAATAATGTTGGACAAGGCATGTAAGGAGGTGAGAGATGCACAGAAGCAGCCTGCAAAATCTCAAAAACAAGATACATCTCAAGGATCCTCTTCCTCCGAAACTCGTCCGCCACCACCTTCTGATTTTCGTCAACGGCTCTTTCCAGCAATTGCTGAAAGGAGGATAGGTGACAGTAGTTCAGATGATGAGAGTCCATAG 2163 0.4725 MFCGRFSKTGQGRKNDERPLLSLSMSDNSVGPSSYGFGNSTTGEKLGFQSSSNNLFGNKKPQVQNSQSIGTFSAASGSPFEVKAHSQWTGTMPSGMPPLKPPPGRLNPLPPEPPSFRPSGNSAAATAPAPATHGPQKLGAGGAPRPGPHPAPVGAKHSPPLPPPPALAAARAHPPPPPPVGARPSPPPPPPPASTGEKPSPPPPPPAPAGAKPGPPPPPPAPAGAKPGPPLPPPKGGIPPPRPPPPIGSSKHKATENIEAGASEADAPKAKLKPFFWDKVQANSDQSMVWNQIKSGSFQFNEEMIETLFGYNTADKNNGQRGKVSSSQEPSPQYIQIIDKKKAQNLLILLRALNVTMEEVCDALYGGNELPAEFLQTLLKMAPTTDEQLKLRLFTGELSQLGPADQFLKAMVDIPFAFKRMEALLFISTLKEDLNSTIESFAVLEVACKELKNSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIKAARLAKESDPKDSPSETEDHYREIGLQVVSHLSSELENVKRAAILDADTLTGTTAKLGHGLMQTKDLLNKDLKNVEEDRGFSDTVRHFVQNAETDVVRLLEEEKRVMALVKSTGDYFHGKAGKDEGLRLFVIVRDFLIMLDKACKEVRDAQKQPAKSQKQDTSQGSSSSETRPPPPSDFRQRLFPAIAERRIGDSSSDDESP 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30686g00005 720 Gene3D Formin, FH2 domain 267 690 IPR042201 -
Stsc30686g00005 720 SUPERFAMILY Formin homology 2 domain (FH2 domain) 332 682 - -
Stsc30686g00005 720 ProSiteProfiles Formin homology-2 (FH2) domain profile. 262 684 IPR015425 -
Stsc30686g00005 720 PANTHER FORMIN-RELATED 66 706 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Stsc30686g00005 720 MobiDBLite consensus disorder prediction 674 693 - -
Stsc30686g00005 720 MobiDBLite consensus disorder prediction 21 93 - -
Stsc30686g00005 720 Pfam Formin Homology 2 Domain 264 658 IPR015425 -
Stsc30686g00005 720 MobiDBLite consensus disorder prediction 95 117 - -
Stsc30686g00005 720 MobiDBLite consensus disorder prediction 1 255 - -
Stsc30686g00005 720 MobiDBLite consensus disorder prediction 702 720 - -
Stsc30686g00005 720 MobiDBLite consensus disorder prediction 145 248 - -
Stsc30686g00005 720 MobiDBLite consensus disorder prediction 667 720 - -
Stsc30686g00005 720 SMART it6_source 262 673 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30686g00005 Stsc-Chr30686 30849 36882 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30686g00005 180 710 FH2 protein (formin) Gene Family AT5G54650 59.191 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30686g00005 - - ccaj:109810281 758.829