Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30685g00005 ATGGCTGTTACCTTCTCAGATCTGCACACAGAGTCTGGTCTCAAAACCCTAGATGAGTTCCTCTCTGGGAAGACCTATGTTTCTGGGGATCAGTTGACAAAAGATGATATCAAAGTGTATGGTTTCGTTTCGGAGAAGCCAGGTAGCTCTTTTCCCAGTGCTGCCAAGTGGTACGATGCTGTCTCTTCCTGCCTTGCTGCAAGCTTCCCTGGCAAAGCTCAAGGTGTGAAATTTGCTGGCCAAGGTGCTCCAGCTGAAGCTGCACCTGCCAAACCGGAGGCAGCTGCTGATGATGATGACGATCTTGATCTCTTCGGTGATGAGACAGAGGAGGATAAGAAAGCAGCGGAGGAGAGGGAGGCTGCAAAGAAGACCACAAAGAAGAAAGAAAGTGGAAAGTCATCCGTTTTGCTCGATGTTAAGCCTTGGGATGACGAAACAGACATGAAAAAGTTGGAAGAGGCTGTTCGTAGCATTCAGAAGGAGGGTCTACTCTGGGGAGCATCCAAACTGGTTCCGGTTGGATACGGCATCAAGAAGCTACAGATCATGATGACTATTGTTGATGATCTTGTGTCTGTAGACGACCTCATTGAGGAGCAACTCACCGTCGAGCCATGCAACGAGTATGTCCAGAGCTGCGACATTGTTGCATTCAACAAAATCTAA 669 0.4828 MAVTFSDLHTESGLKTLDEFLSGKTYVSGDQLTKDDIKVYGFVSEKPGSSFPSAAKWYDAVSSCLAASFPGKAQGVKFAGQGAPAEAAPAKPEAAADDDDDLDLFGDETEEDKKAAEEREAAKKTTKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSIQKEGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDDLIEEQLTVEPCNEYVQSCDIVAFNKI 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30685g00005 222 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 8 222 - -
Stsc30685g00005 222 SUPERFAMILY eEF-1beta-like 130 222 IPR036219 -
Stsc30685g00005 222 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 98 106 IPR001326 GO:0003746|GO:0005853|GO:0006414
Stsc30685g00005 222 FunFam Elongation factor 1-beta 1 like 127 222 - -
Stsc30685g00005 222 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 211 222 IPR001326 GO:0003746|GO:0005853|GO:0006414
Stsc30685g00005 222 Gene3D - 126 222 IPR014717 -
Stsc30685g00005 222 Pfam EF-1 guanine nucleotide exchange domain 135 222 IPR014038 GO:0003746|GO:0006414
Stsc30685g00005 222 SMART EF1_GNE_2 133 222 IPR014038 GO:0003746|GO:0006414
Stsc30685g00005 222 CDD EF1B 131 222 IPR014038 GO:0003746|GO:0006414
Stsc30685g00005 222 SUPERFAMILY GST C-terminal domain-like 10 66 IPR036282 -
Stsc30685g00005 222 MobiDBLite consensus disorder prediction 83 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30685g00005 Stsc-Chr30685 35367 37407 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30685g00005 1 222 Eukaryotic Initiation Factors Gene Family AT5G12110 74.123 9.85e-106 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30685g00005 K03232 - gmx:100500082 298.516