Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30685g00001 ATGGTCAACGTCATGTCTTCATCGCCATCAGAAGGAGAAAACTTTAAAAAAGGTCCATGGACGAGCGAAGAGGATGAAATTCTTGCAGATTACGTAAAGAAACATGGAGCCAAGAATTGGGAAGCTGTTCAGACGAATTCAGGGCTTAAACGCAGTGGCAAGAGTTGTCGTTTAAGATGGACTAATCACTTGAACCCAAGTCTTAAGAAAGGTGTATTAACTCCTCAAGAAATTCATAAAATCATTCAGCTCCATCGTTCTTATGGAAACAAGAGGCGCGTCAGGGCTTATGATGAACACAGGAATGCCAGAAATGCAAATTCAATATCTAAATCATCCCTTGGCATACCAGTGCACCCTCATAGCATAATCCACAGTAATGGTAGCACTAGAACTAGAATGATTCTTCAACCACAACAACAGCAATATCATCCTCAGTATCATGGTGGGGTTTACAAAAAGCTTTGTGAGGAAATTATTATAAAGCAAGTAATAATTGTTATGGTGTTGCACAACAACCTGGCCTATCAGTGCACCCTCGGAACATCAACGGTGCTCCCTCACAGTTCCAACATACATATCAAAGTGGAGCTTTCAATGTACCACCGCCGGGGCCACCACTGGCGCGACCACCACCACTGA 642 0.4299 MVNVMSSSPSEGENFKKGPWTSEEDEILADYVKKHGAKNWEAVQTNSGLKRSGKSCRLRWTNHLNPSLKKGVLTPQEIHKIIQLHRSYGNKRRVRAYDEHRNARNANSISKSSLGIPVHPHSIIHSNGSTRTRMILQPQQQQYHPQYHGGVYKKLCEEIIIKQVIIVMVLHNNLAYQCTLGTSTVLPHSSNIHIKVELSMYHRRGHHWRDHHH 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30685g00001 213 MobiDBLite consensus disorder prediction 1 15 - -
Stsc30685g00001 213 MobiDBLite consensus disorder prediction 1 20 - -
Stsc30685g00001 213 Pfam Myb-like DNA-binding domain 17 64 IPR001005 -
Stsc30685g00001 213 SUPERFAMILY Homeodomain-like 14 106 IPR009057 -
Stsc30685g00001 213 ProSiteProfiles Myb-like domain profile. 12 64 IPR001005 -
Stsc30685g00001 213 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 7 91 - -
Stsc30685g00001 213 SMART sant 16 66 IPR001005 -
Stsc30685g00001 213 Gene3D - 16 69 - -
Stsc30685g00001 213 FunFam MYB-related transcription factor 16 69 - -
Stsc30685g00001 213 CDD SANT 19 64 IPR001005 -
Stsc30685g00001 213 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 68 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30685g00001 Stsc-Chr30685 1738 3599 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30685g00001 12 125 MYB Transcription Factor Family AT2G32460 52.066 7.33e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Stsc30685g00001 Myb_DNA-binding 1.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30685g00001 K09422 - dct:110114505 130.568