Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30680g00005 ATGACCCCTTTAGCCTTCACTCAATTCTATGAAAAATGGTTTGATCGCCTCCACCACCTTGTCAACCAGCTCTCCGATTCTGCTTCCGCCTTCATAGATGTTAAGGGCGACTATTCTACTAATACCCCTCCAATGACGGCGGAGCAGGAAGAAAAGCTGGTTGAGCTGATTGGCAAGGTGATGTTGCACCATGAGGAGTACTTCAGAGCGAAGTCACTCCTTACGGAGAATGACCCTTTGAGCGTGGTGGCTTCTCCGTGGGCCACCACACTTGAGAGATCACTCCATTGGGTCACTGGGTGGAGGCCTACCACGGCCTTCCACCTGGTGTACACGGAGTCTTCTGTGTTGTTTGAGTCTCACATAGTTGATATTCTCCGTGGAGTTCGAACCGGTGATCTCGGTGACCTTTCTCCGACGCAGTTCCGGCGAGTCAGTGAGTTGCAATGTGACACTGTGAAGGAGGAGAATCAAATAACAGATGAGCTTTCAGATTGGCAAGACAGTGCGAGTGAGTCGATGGACCCACGCGCCGATATCAACGAGAAGATCGAACGGCTCGTATGCATCATCAAGAAAGCGGATGATCTACGGCTCAGAACCATGCGCAGCGTTGTTGGCTTGCTATCGCCGCAGCAGGCGATTGAGTTCCTCATCGCCTCTGCAGAGTTGCTCGTTGGAATCCGCGGTTGGGGATCGACTCATGACCGTCCACGTGGCTGA 723 0.5242 MTPLAFTQFYEKWFDRLHHLVNQLSDSASAFIDVKGDYSTNTPPMTAEQEEKLVELIGKVMLHHEEYFRAKSLLTENDPLSVVASPWATTLERSLHWVTGWRPTTAFHLVYTESSVLFESHIVDILRGVRTGDLGDLSPTQFRRVSELQCDTVKEENQITDELSDWQDSASESMDPRADINEKIERLVCIIKKADDLRLRTMRSVVGLLSPQQAIEFLIASAELLVGIRGWGSTHDRPRG 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30680g00005 240 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 6 239 - -
Stsc30680g00005 240 Pfam Seed dormancy control 48 112 IPR025422 GO:0006351|GO:0043565
Stsc30680g00005 240 ProSiteProfiles DOG1 domain profile. 3 238 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30680g00005 Stsc-Chr30680 28696 30573 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30680g00005 52 238 Calmodulin-binding Proteins AT5G65210 23.560 5.22e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30680g00005 - - gsj:114374825 323.553