Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc30668g00010 | ATGACCAAAAAAATGAGCAACTCAACTAGTGGGGGGTATCTTGGGTCAAGCAACATCACTGGCTATGGATATGGAATAGGAATCTCCATTGGGATCCTCCTTCTGATCACCACCATAACCCTAACCTCCTACTTCTGCACCAGACAGAGACAGATAAACAATGTGCTGGAACCGCAGCCGCGGCACAGAGTTGTTGATGTTGGGATAGATGAAGAAACACTTGTGAGTTATCCAAAGTTGTTGTACTCAGAAGCAAAACTGAAGAAGAATAATGATTCAACAGGTGCAGGTATTGGAGCATGTTGTTCTATATGCCTTGCAGATTACAAAGGGAGTGATATGGTTAGGGTGTTACCAGATTGTGGACACCAATTCCATGTAAAGTGCATAGATCCATGGCTGAGGCTGCACCCAACTTGTCCACTCTGCAGAACCTCTCCCATCCCAACTCCTCTCTCAACTCCCTTGGCTGAAGTCGTTCCATTGTCTTCTTCTACCGCACACCATTCTTCATCATAG | 519 | 0.4547 | MTKKMSNSTSGGYLGSSNITGYGYGIGISIGILLLITTITLTSYFCTRQRQINNVLEPQPRHRVVDVGIDEETLVSYPKLLYSEAKLKKNNDSTGAGIGACCSICLADYKGSDMVRVLPDCGHQFHVKCIDPWLRLHPTCPLCRTSPIPTPLSTPLAEVVPLSSSTAHHSSS | 172 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc30668g00010 | 172 | ProSiteProfiles | Zinc finger RING-type profile. | 102 | 144 | IPR001841 | - | |
Stsc30668g00010 | 172 | Pfam | Ring finger domain | 102 | 144 | IPR001841 | - | |
Stsc30668g00010 | 172 | SMART | ring_2 | 102 | 143 | IPR001841 | - | |
Stsc30668g00010 | 172 | SUPERFAMILY | RING/U-box | 79 | 149 | - | - | |
Stsc30668g00010 | 172 | CDD | RING-H2_PA-TM-RING | 101 | 144 | - | - | |
Stsc30668g00010 | 172 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 57 | 148 | IPR013083 | - | |
Stsc30668g00010 | 172 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 5 | 158 | IPR045899 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc30668g00010 | Stsc-Chr30668 | 39375 | 39893 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc30668g00010 | 10 | 163 | C3H Transcription Factor Family | AT5G06490 | 50.000 | 8.09e-55 | 170 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc30668g00010 | - | - | gmx:100811799 | 194.897 |