Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30663g00006 ATGGAACGCGTTATTGGAAGAGCCGATGCAACAGAAGAGATTGTACAGTACCCGTGTGATGTTGACGAGGAATATGTCCCCAAGATTGGAATGAGTTTTGAAACAGTGGTTGAAGCTGGTTTGTTCTATAAAGAATATGCGAAACGTGCAGGCTTCTCTACAAAGATAAGGAACTCAAATACGTGTAAGGTGACCAGGGAAGTAAAGAATCAACTCATCACTTGCAATAGTGAAGGGAGATGGAGATCTGAATTACCTTCTGTAGAGAAGACGAACCCGATATGTGGTGCGAATTGTCCTGCACAAATTTATGTGCATGTAGACAAGAAGACTCGACTTTGGTGTATTTCCAAGGTTGTTCTCCATCATTCACATCCATGCTGTGCTGATCAAGCTCAAATGTTACCACAACATAGGGGCTGA 423 0.4255 MERVIGRADATEEIVQYPCDVDEEYVPKIGMSFETVVEAGLFYKEYAKRAGFSTKIRNSNTCKVTREVKNQLITCNSEGRWRSELPSVEKTNPICGANCPAQIYVHVDKKTRLWCISKVVLHHSHPCCADQAQMLPQHRG 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30663g00006 140 Pfam FAR1 DNA-binding domain 42 127 IPR004330 -
Stsc30663g00006 140 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 18 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30663g00006 Stsc-Chr30663 8920 9753 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc30663g00006 FAR1 2.9e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30663g00006 - - aip:107614666 160.999