LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc30658g00004	ATGAAATTGTTCGATTGGCGGATAACACTGCTCAAATGTGGTGACTTTATCTTTGCTGTCCGTGCGAATCACACAATGTGTGATGGATATGGAATTGCTCAATTCATGAAGGCCATTGTAGAAATAGCCCAAGGTGCATCAAAGCCTTCCATCATGCCAGTGTGGTGTAGAGACCTTCTTTTTGCCAGAGACCCACCAAGAGTTACATGCCTCCACCCTGAGTACCAACAATTACCGCTTCATGACTACAAAACTCCCTCCTTCAAATCCTCCCATGCTTCCTTCTTCTTTGGCTCCAAACAGATACATGCATTGCGCTGCCTCCTCCCCGATCACCTTGCTCAATCATCCTCCACATTCGATGTCCTCACTGCATTCCTCTGGCATTGTTATACTGCTGCACTGTATTGGCAATACCCTAATCAAGAGGTTCTCTTGATGTGCGTAGTCAATGCACGTTTTGAACCTTGCAGATCTACCTTTAATCCTCCACTATCTGAAGGGTATTATGGCAACGCTTTTGTGATGCCTGCGGTAGCTTCCACTGTGGGGATGCTGTGCGAGCGGCCCTTGAGTTATGCGTTGGAGTTGACAAAGAAATTAAAGAAAGTAGCTACTGAGGAGTATGTGCACTCTACTGCTGATCTAATGGCAACTAGCGGAAGGCCTAGCTTTTCCACAAAAGGATCGTTTGTAGTTTCAGACCTAACAAAATTAGGGTTAAGTGATGTGGATTTCGGATGGGGTAAGTCTTTGTATTCCGGACTAAACAAGGCTGGTATAAGTGATTTTCCCGGTGAGAGCTATTATGTTCCATATATTAATTCTGAAGGAGAGCATGGTAAACTGATCTTAATTTGCCTGCCGAAAAATGCCATAAAAAGATTTGAGAAAGAGCTTAATAGAAAACTTCACATCAAGGACCAAGAAAAACCTATCATCAACTCAATTTCCAAGTTACAGTGA	966	0.4348	MKLFDWRITLLKCGDFIFAVRANHTMCDGYGIAQFMKAIVEIAQGASKPSIMPVWCRDLLFARDPPRVTCLHPEYQQLPLHDYKTPSFKSSHASFFFGSKQIHALRCLLPDHLAQSSSTFDVLTAFLWHCYTAALYWQYPNQEVLLMCVVNARFEPCRSTFNPPLSEGYYGNAFVMPAVASTVGMLCERPLSYALELTKKLKKVATEEYVHSTADLMATSGRPSFSTKGSFVVSDLTKLGLSDVDFGWGKSLYSGLNKAGISDFPGESYYVPYINSEGEHGKLILICLPKNAIKRFEKELNRKLHIKDQEKPIINSISKLQ	321

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc30658g00004	321	Pfam	Transferase family	3	300	-	-
	Stsc30658g00004	321	Gene3D	-	1	75	IPR023213	-
	Stsc30658g00004	321	Gene3D	-	76	300	IPR023213	-
	Stsc30658g00004	321	PANTHER	ACYL TRANSFERASE 4	7	303	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc30658g00004	Stsc-Chr30658	23811	24858	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc30658g00004	7	300	Monolignol Biosynthesis Gene Families	AT5G48930	26.623	2.05e-20	89.4

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc30658g00004	K19861		-	gmx:100795237	382.104