Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30658g00003 ATGGTTCTCCAAAAATCATCTTCATCACCATCTATAGTGTTTCAAGTCAGGAGGAATCGAGCGGAGCTAGTGAAACCTGCGGGGTCCACTCCCCATGAGCTTAAACTTCTCTCCGACATTGATGACCAACAAGGTCTACGCATCTACTATTCATTGGTTGAGTTCTTTCCTTATCAGAATTCAATGGCAGGGAAAGACCCTGTCCATGTCATCAAGGAAGCGTTATCCAAAGCACTTGTGTTGTATTATCCATTAGCTGAGAGGCTTAAGGAAGCTCCTAAGGGCAAACTTATGGTGGATTGCACAGGTGAAGGTGTATTGTTCATCGAAGCTAATGCAGATGTTACACTTGAACAGTTTGGTGCTGATCTTCTGCCTCCATTTCCTTGCTTTGATGAGCTCCTCTATCATGTTCCATATTCTGATGATGGAATTGTTGATTCTCCACTCCTTTTTATTCAGCTTAAATTCCTCTACACACCTATATGCTCACGAAAGTAA 501 0.4251 MVLQKSSSSPSIVFQVRRNRAELVKPAGSTPHELKLLSDIDDQQGLRIYYSLVEFFPYQNSMAGKDPVHVIKEALSKALVLYYPLAERLKEAPKGKLMVDCTGEGVLFIEANADVTLEQFGADLLPPFPCFDELLYHVPYSDDGIVDSPLLFIQLKFLYTPICSRK 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30658g00003 166 PANTHER ACYL TRANSFERASE 4 14 122 - -
Stsc30658g00003 166 Pfam Transferase family 16 155 - -
Stsc30658g00003 166 Gene3D - 11 160 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30658g00003 Stsc-Chr30658 22027 22527 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30658g00003 21 158 Monolignol Biosynthesis Gene Families AT5G48930 36.957 1.55e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30658g00003 K19861 - aip:107641488 226.098