Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30658g00001 ATGGTTCTTCAGAAATCATCTTCATCACCATCTATGGTGTTTAAAGTGAGGAGGAATCCAGCAGAGCTAGTGGCACCTGCTGGGCCCACTCCCCATGAGCTTAAGCTTCTCTCCGACATTGATGACCAACAAGGTCTACGTATCTACAATTCAGCGGTTCAGTTGTTTCCTTACAGCCCTTCAATGGCAGGGAAAGACCCTGTTCATGTCATTAGGGAAGCATTATCCAAAGCACTTGTGTTGTATTATTCATTAGCTGGGAGGCTTAGGGAAGCTCCTAAGGGAAAACTTATGGTGGATTGCACTGCCGAAGGTGTATTGTTCATTGAAGCTGATGCAGATGTTACACTTGAACAGTTTGGTGTTGATTTCCTGCCTCCATTCCCTTGCTTTGATGAGCTCCTGTACCATGCTCCATTTTCTAATGATGGAATTATTAATTCTCCACTCTTGCTTATTCAGGTGACACGGCTCAAATGCGGTGGCTTTATCTTTGCTATTCGTATGAATCACACAATGTGTGATGGAACTGGAATCCTTCAATTCATAAAGGCCATTGCAGAAATAGCCCAAGGTGCATCAAAGCCTTCTATCATGCCAGTGTGGTGTAGGGACCTTCTTTGTGCCAGGGACCCACCAAGAGTCACATTCCTCCACCCTGAGTATCAACAACTACCGCTTGATGACTACGAAAATAGTCCCTCTTTCAAATCTTGCCATGCTTCCTTCTTCTTTGGTCCCAAAGACATTGATGCATTGCGCCGCCTCCTCCCTCCTCACCTTGCCCAATCTTCCTCCACTTTCGATATCCTCACTGCATTCCTCTGGCGTTGTCATACCGCTGCACTGCATTCGAAAAACCCTAATAAAGAGGTTCTCTTGATGTGCGTAGTCAATGCACGTTTTGAACCTAGCAGGTTAAATCCCCCACTGCCTAAAGGGTATTATGGTAGCGCTTTTGCGCTTCCTGCCATAGTTTCCACTGTGGGGATGCTATGCAGGCGGCCCTTGAGCTATGCGTTGGAGTTGGCAAAGAAACCAAAGAAAGAAGCAAGTGAGGAGTATGTGCGCTCTACTATCGATCTACTGGCCACGAAGGGAAGGCCTGCCTTCTCGTTGAGAAGATCATTTATAGTTTCAAACCTTTCAAAACTTGAGTTAAGTGATGTGGATTATGGATGGGGTAAGCCTTTGTATATTGGACCAGACAAGGCTGGTATACATGATATTCCTGGTCTGTGCTACTATCTTCCATATACTAACTCTAAAGGAGAGCATGGTACAGTTGTTTTAGTTTGCCTCCCTGAAGATGCCATGAAAAGGTTTGAAAATGAGATTAATGGAATACTACACATCAACGATGAAGATAAACCTATCAACTCAATTATGTCCAATCTGTAA 1401 0.4461 MVLQKSSSSPSMVFKVRRNPAELVAPAGPTPHELKLLSDIDDQQGLRIYNSAVQLFPYSPSMAGKDPVHVIREALSKALVLYYSLAGRLREAPKGKLMVDCTAEGVLFIEADADVTLEQFGVDFLPPFPCFDELLYHAPFSNDGIINSPLLLIQVTRLKCGGFIFAIRMNHTMCDGTGILQFIKAIAEIAQGASKPSIMPVWCRDLLCARDPPRVTFLHPEYQQLPLDDYENSPSFKSCHASFFFGPKDIDALRRLLPPHLAQSSSTFDILTAFLWRCHTAALHSKNPNKEVLLMCVVNARFEPSRLNPPLPKGYYGSAFALPAIVSTVGMLCRRPLSYALELAKKPKKEASEEYVRSTIDLLATKGRPAFSLRRSFIVSNLSKLELSDVDYGWGKPLYIGPDKAGIHDIPGLCYYLPYTNSKGEHGTVVLVCLPEDAMKRFENEINGILHINDEDKPINSIMSNL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30658g00001 466 Gene3D - 224 446 IPR023213 -
Stsc30658g00001 466 Pfam Transferase family 16 446 - -
Stsc30658g00001 466 Gene3D - 11 223 IPR023213 -
Stsc30658g00001 466 PANTHER ACYL TRANSFERASE 4 12 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30658g00001 Stsc-Chr30658 7998 10640 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30658g00001 15 443 Monolignol Biosynthesis Gene Families AT5G48930 31.910 6.71e-48 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30658g00001 K19861 K13610 gmx:100795237 581.252