Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30655g00006 ATGGAGTTGGCCAAGCTTCTACCCATGCCAGAACTTCTGGCACTACTACTCCTTCTCCTACTTTCACTTCATTTCATCACAAGAAAGATTCGGAATCGGAATCAGAATCAGAATCTTCCTCCGGGAAGCTATGGATGGCCAATTGTAGGAGAAACCTTCAAGTTTATAAGCGCGGCTCGCGAGGGATCCGTGGTGAGGTTCATACAAGAGAGAATGGAGAGGTATGATTCGAGGGTGTACAAGACTTCGTTTCTTGGAGATCCCATGGCGGTGTTTTGCGGGCCGGCGGGGAACAAGTTCTTGTTTAGCAATGAGAACAAGAATGTGCAAGTGTGGTGGCCAAGCTCCATAAAGAAGCTCTTAAGATCTTCTTTGGTTAATAAGGTTGGTGATGAAGCTAAGATGACTAGAAGGTTGCTCTTGGCCTTTCTCAATCATGAAATGCTCAGAAATTTCGTCCCTAAAATGGATTCCATTGCTCAAATCCACATTAACACTCATTGGCAAGGAAAAGAGGAGGTGGTTGTTCATTCCACAGTGCAGAAATACACATTTGCTTTGGCTTGTTCCTTGTTTCTGAGCATTGAAGGGCCTCTCCATGATTCAAAGATTTCCTCAAGATTTCACCAATTCTTGAAAGGCCTGGTTGGCTTCCCCATCAACTTGCCCGGAACAAGATTTCACCAAGCAATGAAAGCTGCCAATGAAATAAGGCAAGAGATAAGAAACATCATCAAACAAAGAAAACTGGATTTGGAACAGAAAAGACTAGTGTCTCCAAGCCAAGACATTCTCTCACATTTGCTTGTAACACCTGACTCCAATGGAAGGTTCCTAACCGAAATCGAGATCATGGATAACATACTCCTCCTCCTTTTCGCCGGCCACGACACTTCTAGATCCACTCTCTCATCTCTCATGAGATATTTGGCACAGTTTCCTCATGTTTATGACAAGGTTTTGGCAGAACAAGTTGAAATTAGCAGAGCAAAAGGGGAAGGTGAATCACTGCAATGGGAGGATGTTCAGAAAATGAAGTATTCTTGGAATGTTGCATCTGAAGTCTTGAGACTATCACCACCGGTTACCGGTGCTTATAGAGAAGCCTTAAAGGATTTCACTTATGCTGACTATACCATTCCCAAGGGTTGGAAGTTGCATTGGACAATCTGCTCTTCACACATGGATGAGAAGATCTTTGCAAATCCCGAGGCGTTCGACGCGTGGAGGTTTGAAGGGACGGGTCCTACGGCGTATTCTTATGTTCCGTTTGGTGGAGGGCCTAGAATGTGTCTGGGGCAAGAGTTTGCAAGGTTAGAGATACTTGTGTTCATGCATCACATTGTGAAACGGTTCAAATGGGATTTGGTTGATCCTAATGAGAAGTTCAAGTATGATCCCATGCTTGAACCTGTAAATGGACTTCCCATTCTGCTTCACCCTCACCATTGA 1452 0.4428 MELAKLLPMPELLALLLLLLLSLHFITRKIRNRNQNQNLPPGSYGWPIVGETFKFISAAREGSVVRFIQERMERYDSRVYKTSFLGDPMAVFCGPAGNKFLFSNENKNVQVWWPSSIKKLLRSSLVNKVGDEAKMTRRLLLAFLNHEMLRNFVPKMDSIAQIHINTHWQGKEEVVVHSTVQKYTFALACSLFLSIEGPLHDSKISSRFHQFLKGLVGFPINLPGTRFHQAMKAANEIRQEIRNIIKQRKLDLEQKRLVSPSQDILSHLLVTPDSNGRFLTEIEIMDNILLLLFAGHDTSRSTLSSLMRYLAQFPHVYDKVLAEQVEISRAKGEGESLQWEDVQKMKYSWNVASEVLRLSPPVTGAYREALKDFTYADYTIPKGWKLHWTICSSHMDEKIFANPEAFDAWRFEGTGPTAYSYVPFGGGPRMCLGQEFARLEILVFMHHIVKRFKWDLVDPNEKFKYDPMLEPVNGLPILLHPHH 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30655g00006 483 Gene3D Cytochrome P450 28 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30655g00006 483 Pfam Cytochrome P450 40 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30655g00006 483 CDD CYP90-like 71 481 - -
Stsc30655g00006 483 PANTHER CYTOCHROME P450 26 36 467 - -
Stsc30655g00006 483 SUPERFAMILY Cytochrome P450 36 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30655g00006 483 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 424 433 IPR017972 GO:0005506|GO:0016705
Stsc30655g00006 483 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30655g00006 483 PRINTS E-class P450 group I signature 431 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30655g00006 483 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30655g00006 483 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30655g00006 483 PRINTS E-class P450 group I signature 421 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30655g00006 483 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30655g00006 483 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30655g00006 483 PRINTS P450 superfamily signature 422 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30655g00006 483 PRINTS P450 superfamily signature 431 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc30655g00006 483 FunFam Taxadiene 5-alpha hydroxylase 30 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30655g00006 Stsc-Chr30655 23205 25441 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30655g00006 38 386 Cytochrome P450 AT5G36110 44.034 6.94e-101 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30655g00006 - - adu:107480504 704.901