Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30654g00001 ATGGGGACCATGTGTGATCAGACTATGTCAATGGCTGAGTTTGGTAAGGGAGATAGAAGCAAAAACTCTGTGAGTGATGAAGATGAGCCGAGTTTGACCGAGGATGGTGGTGATGGTCATCATGAAGCAGGCAGAACAAAGAAGGGATCGCCTTGGAGGCGGGTCAAGTGGACTGATAAGATGGTGAAGCTTATGATAACAGCTGTTTCGTATATAGGCGAGGATTCAACTTCTTATGTTGCCGGAAGAAGAAAAGTCGTTGTCCTTCAAAAGAAGGGCAAATGGAAGACTATTTCCAAGGTCGTGGCTGAAAGGGGTTATCATGTTTCCCCTCAGCAGTGTGAGGATAAATTCAATGATCTGAATAAACGCTATAAAAGGCTTAATGATATGCTTGGCAGGGGCACTTCTTGTCAGGTTGTTGAAAATCCTGAGCTGTTGGATTTAATTGACTATCTTTCTGAGAAAGAAAAAGATGATCTAGCTCTCCGAAGTAGAGATGATCATGACGAAGATGATCAAGATATGGAAACTGAGGATCATGATGAATTTGAAGAGAATCATGCTTCCCATGGGGATTGCAGAGGAATCCACGGGTCCTTAGTGGGACCTATGAAGAAATTAAAACAAGGACAAGGCCAAGAAAACACTGCTACTTTTGGGAATTCTTTAAATTGTCAAGAATATAACAAAAGTTTGCACTCTCATGGACGAATGGTCCAATCAGACGCGAATCAAGCTTTACCTGAAAACTTGAGAGTGGCATGGTTACAGAAGCAATGGGTTGAATCTCGCTCAATTCAGTTAGAAGAACAGAAACTACAGAGACAGATTGAGATGTTGGAAGTAGAGAAGCAGAGATTCAAGTGGCAGAAGTTCAGTAAGAAGAAAGATCGGGAGTTGGAGCAGTTGAAGCTGGAGAATGAAAGGATTAAGCTTGAGAACGAACGTCTTGCTTTATAG 963 0.4216 MGTMCDQTMSMAEFGKGDRSKNSVSDEDEPSLTEDGGDGHHEAGRTKKGSPWRRVKWTDKMVKLMITAVSYIGEDSTSYVAGRRKVVVLQKKGKWKTISKVVAERGYHVSPQQCEDKFNDLNKRYKRLNDMLGRGTSCQVVENPELLDLIDYLSEKEKDDLALRSRDDHDEDDQDMETEDHDEFEENHASHGDCRGIHGSLVGPMKKLKQGQGQENTATFGNSLNCQEYNKSLHSHGRMVQSDANQALPENLRVAWLQKQWVESRSIQLEEQKLQRQIEMLEVEKQRFKWQKFSKKKDRELEQLKLENERIKLENERLAL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30654g00001 320 Pfam Myb/SANT-like DNA-binding domain 54 143 IPR044822 -
Stsc30654g00001 320 MobiDBLite consensus disorder prediction 19 51 - -
Stsc30654g00001 320 PANTHER F16F4.11 PROTEIN-RELATED 7 161 - -
Stsc30654g00001 320 Coils Coil 294 316 - -
Stsc30654g00001 320 Gene3D - 57 127 - -
Stsc30654g00001 320 Coils Coil 264 291 - -
Stsc30654g00001 320 MobiDBLite consensus disorder prediction 1 51 - -
Stsc30654g00001 320 MobiDBLite consensus disorder prediction 160 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30654g00001 Stsc-Chr30654 7428 8705 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Stsc30654g00001 Myb_DNA-bind_4 2.1e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30654g00001 - - gmx:100812134 480.715