Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30648g00001 ATGGACAAAGATTCCACCATTGAATCTCTGCCTGACATTGGTCAAAGAGCATTTGGAGACAAAGGAAGGTTACTAGTTAACATTGCAATGAATTGTGAACTTTATTTGGTTATAACTGGTTACTTGATTCTTGAAGGAGATAACTTGAACAAGTTAATATCTCACTTTCATGTGGATGTTGGAGGATTGAGAATCAGTGGAACACAATGTTTTGTTCTGATTTCAGCATTGATTATTCTCCCAACTGTATGGTTGGAAGATCTAAGCAAACTTCTATCATATGTGTCTGCAACTGGGGCCTTAGCATCAGTTATATTTCTGTGTTCATTGTTTTGGAATGGTACAATTGATGGAACAAAACTTCATAGCAAAGGTGTTCTCTTTAATTGGAAGGGAGTTCCTGCTGCAGTCAGTTTGTATGCATTTTGCTACAGTTCTCATCCTGTCTTTCCGAGTCTCTACACATCCATGAAGAACAAGCATCAGTTCTCTAATGTGTTGTTGGTGTGCTTCATATTGTGCACTCTAGTATATGCAGCAACAGCAGTTTTGGGATACCTAATGTTTGGATCAGAGGCACTGCAATTGCTGCCTTTGGAACTTACTCGTCACTACTACAAATAA 624 0.3846 MDKDSTIESLPDIGQRAFGDKGRLLVNIAMNCELYLVITGYLILEGDNLNKLISHFHVDVGGLRISGTQCFVLISALIILPTVWLEDLSKLLSYVSATGALASVIFLCSLFWNGTIDGTKLHSKGVLFNWKGVPAAVSLYAFCYSSHPVFPSLYTSMKNKHQFSNVLLVCFILCTLVYAATAVLGYLMFGSEALQLLPLELTRHYYK 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30648g00001 207 Pfam Transmembrane amino acid transporter protein 7 195 IPR013057 -
Stsc30648g00001 207 PANTHER OS05G0424000 PROTEIN-RELATED 8 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30648g00001 Stsc-Chr30648 2862 4260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30648g00001 1 204 Amino Acid or Auxin Permease AAAP Family AT3G28960 54.902 2.73e-79 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30648g00001 K15015 - cit:102612989 268.47