Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30643g00001 ATGGAACCGACGTTGCACGCGCAACAACAACCATCTCCGCCGCAAACCTCGCCGCGCTCCACCATTATCCTCGGCAAGTACCAGCTCACGCGCCTCCTAGGCCGCGGAAGCTTCGCCAAGGTCTACCAGGCGCTCACGCTTTCCGATGGCTCCACCGTTGCCGTCAAAATCATCGATAAATCCAAGACGGTGGATGCCGCCATGGAGCCGCGCATCCTTCGCGAGATCGCCGCCATGCGCCGCCTCCATCACCACCCTAACATCCTCAAGATCCACGAGGTCATGGCTACCAAGACCAAGATCCATCTCGTTGTAGAGTTCGCGGCTGGAGGTGAGCTATTCGCCAAGATCCTCCGCCGTGGACCGCTCCCGGAGCAAGCGGCGAGGCGGTACTTCCAGCAGCTCGTCTCCGCGCTCCGGTTCTGCCACCGAAACGGCGTTGCGCACCGAGACCTCAAGCCGCAGAATCTCCTCCTTGACGCAGCCGGAAACCTGAAGGTCTCCGATTTCGGCCTCTCCGCCCTGCCGGAGCAGCTGAACAATGGCCTCCTACAAACCGCATGCGGAACTCCGGCTTACACCGCGCCGGAGATCCTCCGCCGCCGTGGAAACTCCGCTGGATACGACGGCGCAAAGGCGGACGCCTGGTCGTGCGGCCTTGTCCTCTACAATCTCCTCGCCGGAAGCCTTCCGTTCAACGACTCTAACATTCCGGAGATGTGCCGGAAGATTTCCCGGCGAGATTACCGGTTTCCAGAGTGGATCTCGAAACCTGCGCGTTTCGTAATCTACCGGTTACTCGACCCGAACCCGGAAACCCGTATGAGCGTGGAGGCTCTTTACCAGAACTCATGGTTCAAGAAATATTTAAAACCCGAACCGGAGGGGAGTGTATTCGGGTCGGATCCTCATTATGAGAGTTCTTGCAAAGGGATTAACAATAAGGGAATGAATGCGTTTGATATAATTTCTATGTCTTCTGGTTTGGACTTGAGGGGGTTGTTTGAAACGACGTCGTTTGGGGATAGAAGAGAAAAGAGGTTTACGTCAAATGCTAAGGTAGAGGAGGTGGAGGCGAAGGTGAAGGAAATTGGAGGGGATTTAGGGTTTAGGGTTGAGGTTGGAAAGAACGGAGCGATTGGGTTGGGGAAAGGGAAGGTGATGCTGGTTGTGGAGGTTCTTGAGATTGTAGAGGGTGAGTTGTTAATGGTGGATGTGAGGGTTGTTGAAGGTGGTTTGGAATTTGAGGAGCTTCATTGGAGGGACTTGAAAGATGGGTTGCAAGATGTTGTCCTTTCTTGGCATAATGAATCACCACCACTACCACTACCACAATCATCACCATAG 1347 0.5486 MEPTLHAQQQPSPPQTSPRSTIILGKYQLTRLLGRGSFAKVYQALTLSDGSTVAVKIIDKSKTVDAAMEPRILREIAAMRRLHHHPNILKIHEVMATKTKIHLVVEFAAGGELFAKILRRGPLPEQAARRYFQQLVSALRFCHRNGVAHRDLKPQNLLLDAAGNLKVSDFGLSALPEQLNNGLLQTACGTPAYTAPEILRRRGNSAGYDGAKADAWSCGLVLYNLLAGSLPFNDSNIPEMCRKISRRDYRFPEWISKPARFVIYRLLDPNPETRMSVEALYQNSWFKKYLKPEPEGSVFGSDPHYESSCKGINNKGMNAFDIISMSSGLDLRGLFETTSFGDRREKRFTSNAKVEEVEAKVKEIGGDLGFRVEVGKNGAIGLGKGKVMLVVEVLEIVEGELLMVDVRVVEGGLEFEELHWRDLKDGLQDVVLSWHNESPPLPLPQSSP 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30643g00001 448 MobiDBLite consensus disorder prediction 1 20 - -
Stsc30643g00001 448 FunFam Non-specific serine/threonine protein kinase 20 112 - -
Stsc30643g00001 448 ProSitePatterns Protein kinases ATP-binding region signature. 33 56 IPR017441 GO:0005524
Stsc30643g00001 448 Gene3D Phosphorylase Kinase; domain 1 29 112 - -
Stsc30643g00001 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Stsc30643g00001 448 Gene3D Transferase(Phosphotransferase) domain 1 113 297 - -
Stsc30643g00001 448 ProSiteProfiles Protein kinase domain profile. 27 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30643g00001 448 SMART serkin_6 27 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30643g00001 448 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 16 376 - -
Stsc30643g00001 448 SUPERFAMILY Protein kinase-like (PK-like) 23 295 IPR011009 -
Stsc30643g00001 448 ProSiteProfiles NAF domain profile. 312 336 IPR018451 GO:0007165
Stsc30643g00001 448 Gene3D Kinase associated domain 1, KA1 313 432 - -
Stsc30643g00001 448 FunFam Non-specific serine/threonine protein kinase 17 315 - -
Stsc30643g00001 448 CDD CIPK_C 318 428 - -
Stsc30643g00001 448 Pfam Protein kinase domain 27 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30643g00001 448 Pfam NAF domain 317 373 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30643g00001 Stsc-Chr30643 5575 7966 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30643g00001 12 436 CBL-interacting serine-threonine protein kinases AT4G14580 60.970 1.82e-171 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Stsc30643g00001 Pkinase 5.8e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30643g00001 K12761 - gmx:100784173 609.757