LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc30638g00003	ATGTCTTCTGCAACAACATTAACCCAATCATCCTTGCATAGTACTAGTATGCATCAATCATCATCAGATGAAGACAGGTCCCAAATCTTCAACAACTACTATGGAAATGGAATCATCACTATTACTACTACTAGTGTTAGTGAGATAGTAGAGGTAGAAGAAGAGGAAAACATGATCAAGTCATCATCAAATTTGTACCTTAATCATGAAGTTTCTAGGAATACTATGTCAAGAATCAGTGAAGGGAGGAGCAGTGAAATAATAATGGAGGAAGAAGATATTGTTTATGTAGCAGTTGGTAAGAGTGAGACAAGCATGGAAGCTCTCACATGGACTCTCAAGAACATGGCAACTACCTCATCTACCATGCTTTATCTCATACATGTTTTTCCTGAGATCAAACACATTCCAAATCCATCTGTTGTTTCTGCAATGACAGTGGGAATGGGAATGATCCCAAAGAGCCAAGTGAGTGGTGAGCAAGTTGAGAGCTTCATGGCCCAAGAAAGAGCCAAGAGGAGAGACCTCCTTCACAAGTTCCTCCAAACATGTTCTGCTTGCAAGGTTAAGGTGGACACCATTCTCATTGAGAGTGATTTCATTGCAAAGGCCATACTAGACTTGATCCCCATTCTTCAAATCACAAAACTAGTTCTTGGACTCAACAAATCCCAATTAAGAAAATTGAGATCAAGAAAAGGGAATGGCATAGCAGATCAAGTACTTGAGGGTGCACCAGAAATGTGCAAGGTGAGAATTGTGTGTGAAGGAAAGGAAGTTACTGAAAAGATAAGTGGTTTAGGGTCACCCTCTCCTTCTCCTCGTGCCATCACTTCCATGTCCCATAATAAACAAAAAGACCCTCTCAAAAAAGATTCTGTTTCATGTAACTGTTTTCACTTTTAA	906	0.3974	MSSATTLTQSSLHSTSMHQSSSDEDRSQIFNNYYGNGIITITTTSVSEIVEVEEEENMIKSSSNLYLNHEVSRNTMSRISEGRSSEIIMEEEDIVYVAVGKSETSMEALTWTLKNMATTSSTMLYLIHVFPEIKHIPNPSVVSAMTVGMGMIPKSQVSGEQVESFMAQERAKRRDLLHKFLQTCSACKVKVDTILIESDFIAKAILDLIPILQITKLVLGLNKSQLRKLRSRKGNGIADQVLEGAPEMCKVRIVCEGKEVTEKISGLGSPSPSPRAITSMSHNKQKDPLKKDSVSCNCFHF	301

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc30638g00003	301	MobiDBLite	consensus disorder prediction	264	288	-	-
	Stsc30638g00003	301	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	96	246	-	-
	Stsc30638g00003	301	Gene3D	HUPs	94	254	IPR014729	-
	Stsc30638g00003	301	MobiDBLite	consensus disorder prediction	266	283	-	-
	Stsc30638g00003	301	PANTHER	U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE	43	300	-	-
	Stsc30638g00003	301	MobiDBLite	consensus disorder prediction	1	24	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc30638g00003	Stsc-Chr30638	13215	15705	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc30638g00003	95	263	U-box Gene Family	AT5G65500	30.682	3.30e-12	65.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc30638g00003	-		-	gmx:100781056	268.085