Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30638g00002 ATGAAGAAGAAGAATAGAAGAAACCAAGTGTTTGATTTTGATCACAACAAAAGATGCATCATCACAAGTGATTATGAAATTGAAGAATCCTCAGAGGATTTGTTTGAGATCAGTCTCAATAATTTAGAAGAAGAAGAAGAAGATTTGTTCTCTATAGATATTGAGAATGTGAGAGATGTTGTTGTTCATGTGGCAGTGGGCCACAATGGAGAATCAAGCATGGAAGCACTTTTATGGGCTTTGAAGCATTATGTCACACCATTTACCATTCTCCATCTCATTCATGTTCTTCCTCAAATAACCCTCATTCCAACCCCATTTGGAAAAATTCCAAGGAAACTTGTGAATGAGCAGTGTGTTGACACTTACTTGACAGAAGAGAAAAGCAAGAGGAAATTGCTTCTTCAAAAGTTCATTGACTTGTGCAATCTTAAAAAGGTGAAGGTGGAGATGTTGCTTATTGAAGGTGACAATGTTACCAAAGCCATAGTGGAGCTTGTAAACAATCTTCATATAAAGAAATTGGTAATTGGAACAAGCAAGTATAATTTAAGAAGGAGACAAGGCATAGCAAGTAAGGTGGTGAAGAATTTAGCAGTGAAATGTGATGTTAAAATCATTTGTGAAGGAGAGGAAGTAATTGATCAGATTATTGGAATTGAATGCAGTTCATCACCACCCTCTAATGATGTTAACAACTGCAGAGTTTCACAAACAGAAGATGAATGCATTGAATCTGTTCCTCTTATACAACTCATGCAAAATTCTATGAGGGCATTTAGACCAAGATTTCACTAA 798 0.3584 MKKKNRRNQVFDFDHNKRCIITSDYEIEESSEDLFEISLNNLEEEEEDLFSIDIENVRDVVVHVAVGHNGESSMEALLWALKHYVTPFTILHLIHVLPQITLIPTPFGKIPRKLVNEQCVDTYLTEEKSKRKLLLQKFIDLCNLKKVKVEMLLIEGDNVTKAIVELVNNLHIKKLVIGTSKYNLRRRQGIASKVVKNLAVKCDVKIICEGEEVIDQIIGIECSSSPPSNDVNNCRVSQTEDECIESVPLIQLMQNSMRAFRPRFH 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30638g00002 265 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 23 234 - -
Stsc30638g00002 265 Gene3D HUPs 51 213 IPR014729 -
Stsc30638g00002 265 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 70 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30638g00002 Stsc-Chr30638 11215 12743 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30638g00002 64 211 U-box Gene Family AT4G25160 32.895 1.33e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30638g00002 - - aprc:113852199 254.218