Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30634g00010 ATGTCTGTAGCTGCTCCAAGTTCCCTTTTGAAGGTGGAGGAGATACAAGGAAGAGGGAGGGGATTGGTTGCATCACAACCTCTTAAAGGTGGCCAAATTGTCCTTAGAGATTCTCCTATCCTCCTCTATTCTGCATTGCCACTGATCCCGCAGTCTTTATCCTCGTCCTCCTCCTTCTGCAATCACTGCTTTAGAACCTTACCATCCTCTTTACAGGGTGATCCTTCATCCTCCTCAGTTTTGTGCCCTTCATGTAGCCATCATCGCTTTTGCAGCTCTAACTGTCTCTCCAAGGCACTGAATTCAACCCATTCTTCTTGGGTATGTCGAGCATTGTCTCGCTTACAAGCCAGCTCCCCACTTCTTGGACAGCCTCTTGAGCTCCAAGTCCAGGCTCAATTTCTGATTGCTGCATACAATCTTGCCAACATCTCCCCCTCGGACTTCCAGATCTTGCTTTCTCTTCATGGTTCTCCTGATGACACTACAATTTCTGCAGCTCAGTTCCTACACCCTCTTATTTCATCCCTCTTCTCAATTGCTCCCATTGGTCTACNNNNNNNNNNATTTTCTTTGGAACTCACCTCTGCACTTCTGGCCAAGGACAAGCACAATGCCTTTGGCTTGATGCAGCCAGTTTCTGTTGATGATGGCGAGAGGTCTGTTAGAGCTTATGGTATCTACCCCTATGCCTCCTTTTTTAATCATGATTGCCTTCCCAATGCCTGCAGATTTGATTATGTGGATAATAATTCACCAGATGACGGTCATAATACTGACATTATTGTTAGGATGATTCATGATGTTCCCCAAGGCAGGGAGATCTGTTTGAGTTATTTCCCTGTCAATGAAAACTATGCTAGCAGGCAGAAGAGATTGAAGGAAGACTATGGCTTCACCTGTAATTGTGATCGGTGTAATGTTGAATCAAATTGGTCAGATAACGATGAGAATATCGAAGAAGATAATGCAGAGGATGCAGAAGAGGTTATGGATGAGGAGGACCAATATGAAAACATGGCAGCATCAGATACCGACAATAATAATGATTTCCCTCATGCATATTTCTTTTTAAGGTACATGTGTGATAGACCAAATTGCGGGGGAACTTTAGCTCCTCTACCCCCTCAAGGTGACATTCCATCTAATGTCATGGAATGTAATGTCTGTGGAAAATTGAGAAGTGATGATGAGCAAGATGAAGCTCCCATGGAGGACTGA 1221 0.4398 MSVAAPSSLLKVEEIQGRGRGLVASQPLKGGQIVLRDSPILLYSALPLIPQSLSSSSSFCNHCFRTLPSSLQGDPSSSSVLCPSCSHHRFCSSNCLSKALNSTHSSWVCRALSRLQASSPLLGQPLELQVQAQFLIAAYNLANISPSDFQILLSLHGSPDDTTISAAQFLHPLISSLFSIAPIGLXXXXFSLELTSALLAKDKHNAFGLMQPVSVDDGERSVRAYGIYPYASFFNHDCLPNACRFDYVDNNSPDDGHNTDIIVRMIHDVPQGREICLSYFPVNENYASRQKRLKEDYGFTCNCDRCNVESNWSDNDENIEEDNAEDAEEVMDEEDQYENMAASDTDNNNDFPHAYFFLRYMCDRPNCGGTLAPLPPQGDIPSNVMECNVCGKLRSDDEQDEAPMED 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30634g00010 406 CDD SET_SMYD 204 306 - -
Stsc30634g00010 406 Pfam SET domain 19 279 IPR001214 GO:0005515
Stsc30634g00010 406 Gene3D - 59 118 - -
Stsc30634g00010 406 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 1 401 IPR044238 -
Stsc30634g00010 406 SUPERFAMILY SET domain 10 307 IPR046341 -
Stsc30634g00010 406 Gene3D - 119 206 - -
Stsc30634g00010 406 ProSiteProfiles SET domain profile. 8 280 IPR001214 GO:0005515
Stsc30634g00010 406 SMART set_7 8 286 IPR001214 GO:0005515
Stsc30634g00010 406 Gene3D SET domain 21 306 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30634g00010 Stsc-Chr30634 30411 33901 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Stsc30634g00010 SET 1.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30634g00010 - - gmx:100783406 603.979