Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30631g00001 ATGACTCAGCATGGAGTTGGATGTAACACTTTCATATGTTCCGAAGACATCAATAGGCTGACGAGAATGAAAACTCACCACATTGTTGGCGCAGCAGGGTTCCAACAGACTCCTCGGATGTTTGTACCCCGCGATGTTGGGATTATGGATCCGCCACCGGCACTTGTGGAGGCCGGAGATCAATACCTTCCACCTCCCGTGACTGCGTGCATGCGTGACTGGCTTTGTTTGGCCATTACCAGTGCCGCGACCACTACTGGGGGACTGGTGCAGTTCGGTTTCACGACCACTGCTGGCGCCACTGGATTCATTAGCATAGATTGTGGACTACCTGAAAATTCCAGCTACACTGAGAAGAACACAGGAATCATTTACATCTCAGATGCTAATTTCATAGATTCTGGTGTGAGTAAGACAGTGTCGCCTCAAAATATTGCTACTCATGAACAATATTTTACTTACCTTAGGAGCTTTCCTAATGGAACAAGAAACTGTTACAGAATAAATGTAACTATCAACACTGAATATTTAATCAGAGCTAGTTTCTTGTATGGAAACTATGATGGTCTAAATAAGCTTCCAGAATTTGAAGTTCATGTTGGAACTAATTTGTGGGACACCTTGAAATTCTCGGATGCATCAGTGAGCATATACAGAGAGCTGTTTCACCCTGCAACAAGAGATTATATAGAAATATGTCTGGTTAACATAGGAACTGGAACACCATTCATTTCTGCTATAGAAATGAGGATTTATCAGAAGTATAATCCTGACTCTGGACTTCTCTCATCAGCCTCGGCTGAACGATTCAAAGGACTAGATTTGGGCAGCATGAACAATTCAACAAGCAGGTACAAAGATGACATATATGACTGCTTATGGGAGCCTTACTCTGTTAATGGGTGGAAACGATTATACAGAACACATGGTGAACCTAATCCAACTCAGAAAAAGGCATATCTTGATGGGACTTATTATCCACCAGCAAGTGTGATGAGAACAGCAGCTACACCAAGAATTGCTACAGATTCTTTGGATTTCTACTTTCACTTGGATAACAGCGTTGGGCATATATATGGTTTCAAATTCTTATTTGCTGAGGTGCAAGAGCTGGCAGCAAATGAAACAAGATCATTCAACATCTCCGTGAATGGCAATTATTGGAAAGGACCCATTCTACCCTCATACAATGAAACAACTACCTACAGTATTTTGACTTTTGATTTGCCGCCGAGTGTTAGTGATGATTACAGATTTTCAATTCTTCCCACAGAATTCTCTACCCTTCCACCTATCATCAACGCTCTTGAGATTTTTCTTGTTAAGGATTTCTCACAGCCACAAACTGACAAGGATCAAGCTGATGCTATGAGAAATATCAAGATAGCTTATGGAGTGTTAAAAAATTGGCAAGGAGATCCATGCGCCCCTGTAGCATACGCATGGGACGGTCTAAATTGTAGTTCAACTGGTTCTCTAAAAATCACATCCTTCAATTTATCTTCCAATGGACTAACAGGACAAATTGTATCTTACATCTCCATGCTTAGGGACTTAGAATCCTTGGATTTATCAAATAACAGCTTAATCGGGGGGATACCTGATTTTCTTGCAGACCTGCCATCACTTAAAGTCCTGAACCTGCAGAATAACCACCTCACAGGTCAAGTTCCAAATGCACTTCTCCAAAGATCAAGCGATGATTATTTCGAAGTTCTTAAGCAGTCTAGTGATCAAACTGAATCACAGTTGGAATCTAAGAGAAGACGGTATTCATTCAAAGAAGTATCTAACATGACCAATAATTTCGAAAGAATCCTCGGTAGAGGTGGATTCGGAACGGTTTACTATGGCATTATTGATGACATTCAAGTAGCTGTCAAGATGCTTTCTCAATCATCAGTACAAGGATATCAGCAATTTCTAGCAGAGGTTAATCTTCTGATGAGGGTTCATCATAGGAATCTAACTTGCCTCATTGGATATTGCAATGAAGAAGCCAACATAGCACTCATCTATGAATATATGGCAAATGGCAACTTAGAGGAACATCTTTTGGAGAAAAATAGTAGGGCAAAGTTGTTCAGTTGGGAAGAAAGGCTCAACATAGCCATGGATGCAGCCCAAGGACTTGAATATCTACATAATGGTTGTAAGCCACCTATAATCCACAGAGATGTGAAATGCTCAAACATTTTACTAAATGAAAATTTCCAAGCGAAAATGGCTGACTTGGGCTTGTCTAGAAGCTTCCCGGTTGACGGCGGCACACATGTAACAACCGTCATTGCCGGGACTCCTGGTTACTTGGATCCAGAGTATCGAGTATCAAATAGGCTAACAGAGAAGAGCGATGTTTATAGTTTTGGAGTAGTTTTATTGGAGATAATCACGGGTAAACCAGCAATAATTAAAGCATCAGTTGTAGAAAAAATCCACATAAGTGAGTGGGTTGAATCCATGCTGGCAAAAGGAGATGTAAAATGTATTGTTGACACAAGATTACAAGGAGATTTTGAGAGTAGTTCTGTTTGGAGAGCTGTTGAAATAGCAATGGCTTCTGTGTCCGATAAATCCTCCAAAAGACCACACATGACTGATATTGTGACTGAGCTAAAGGAATGTTTGGCTATGGAGTTAGCACGAAAACACAAAAGTTGCAGAACCATGACCGTGAATTTGGCTCCAGAGAGTAGCTCCTTGGCTTGA 2709 0.4097 MTQHGVGCNTFICSEDINRLTRMKTHHIVGAAGFQQTPRMFVPRDVGIMDPPPALVEAGDQYLPPPVTACMRDWLCLAITSAATTTGGLVQFGFTTTAGATGFISIDCGLPENSSYTEKNTGIIYISDANFIDSGVSKTVSPQNIATHEQYFTYLRSFPNGTRNCYRINVTINTEYLIRASFLYGNYDGLNKLPEFEVHVGTNLWDTLKFSDASVSIYRELFHPATRDYIEICLVNIGTGTPFISAIEMRIYQKYNPDSGLLSSASAERFKGLDLGSMNNSTSRYKDDIYDCLWEPYSVNGWKRLYRTHGEPNPTQKKAYLDGTYYPPASVMRTAATPRIATDSLDFYFHLDNSVGHIYGFKFLFAEVQELAANETRSFNISVNGNYWKGPILPSYNETTTYSILTFDLPPSVSDDYRFSILPTEFSTLPPIINALEIFLVKDFSQPQTDKDQADAMRNIKIAYGVLKNWQGDPCAPVAYAWDGLNCSSTGSLKITSFNLSSNGLTGQIVSYISMLRDLESLDLSNNSLIGGIPDFLADLPSLKVLNLQNNHLTGQVPNALLQRSSDDYFEVLKQSSDQTESQLESKRRRYSFKEVSNMTNNFERILGRGGFGTVYYGIIDDIQVAVKMLSQSSVQGYQQFLAEVNLLMRVHHRNLTCLIGYCNEEANIALIYEYMANGNLEEHLLEKNSRAKLFSWEERLNIAMDAAQGLEYLHNGCKPPIIHRDVKCSNILLNENFQAKMADLGLSRSFPVDGGTHVTTVIAGTPGYLDPEYRVSNRLTEKSDVYSFGVVLLEIITGKPAIIKASVVEKIHISEWVESMLAKGDVKCIVDTRLQGDFESSSVWRAVEIAMASVSDKSSKRPHMTDIVTELKECLAMELARKHKSCRTMTVNLAPESSSLA 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30631g00001 902 ProSitePatterns Serine/Threonine protein kinases active-site signature. 722 734 IPR008271 GO:0004672|GO:0006468
Stsc30631g00001 902 Gene3D Transferase(Phosphotransferase) domain 1 676 895 - -
Stsc30631g00001 902 ProSiteProfiles Protein kinase domain profile. 601 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30631g00001 902 PANTHER OS07G0107800 PROTEIN-RELATED 104 876 - -
Stsc30631g00001 902 SUPERFAMILY Protein kinase-like (PK-like) 580 872 IPR011009 -
Stsc30631g00001 902 ProSitePatterns Protein kinases ATP-binding region signature. 607 628 IPR017441 GO:0005524
Stsc30631g00001 902 Gene3D Ribonuclease Inhibitor 454 569 IPR032675 -
Stsc30631g00001 902 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 676 885 - -
Stsc30631g00001 902 Pfam Leucine rich repeat 495 553 IPR001611 GO:0005515
Stsc30631g00001 902 CDD STKc_IRAK 607 874 - -
Stsc30631g00001 902 SUPERFAMILY L domain-like 478 562 - -
Stsc30631g00001 902 Gene3D Phosphorylase Kinase; domain 1 588 675 - -
Stsc30631g00001 902 SMART serkin_6 601 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30631g00001 902 FunFam Leucine-rich repeat receptor-like protein kinase 579 675 - -
Stsc30631g00001 902 Pfam Protein tyrosine and serine/threonine kinase 603 871 IPR001245 GO:0004672|GO:0006468
Stsc30631g00001 902 Pfam Malectin-like domain 106 440 IPR024788 -
Stsc30631g00001 902 FunFam Leucine-rich repeat receptor-like kinase 453 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30631g00001 Stsc-Chr30631 2583 10059 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30631g00001 102 884 Receptor kinase-like Gene Family AT1G51880 45.573 0.0 695
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Stsc30631g00001 Malectin_like 1.1e-85 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30631g00001 - - qsa:O6P43_027684 904.82