Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30623g00004 ATGGATAATGGTTTTCCTCCCGAGGTTACCAACCATTTCTTATTTGGTTTCCCTGATAACTGGGAAAGGTATGCCACAGATTTGTTTAGGAATGACTCAAGTATTGGCACTGAATTGGGTAGTGATGTTCCTGAAAATGTATCAGCAATTGAGCCTGAGATCTGTTCTGATGGTCTTGAAAAATCTGTCCCATCTTCTTCGAAACCCTTAAAAGAAGCATCTGGAGCTCATGGGAAGTCACATCCTGAAGTTGAATGCCATGATTCTGGCACTACAAGGGGGGTTAATGCTGCTCAAGGCAGTGGCAGCTTTAGACGTAGCACCAGATTGCACAACATGAAAGTCTGTCAGCAGAAGAAGCCTGCTTCTGGGGTTCCTCAGAAGCATCCAGAAGAACTGAACAGTCCAGCGACGCCAGTTCAGTTACAATCTCTGGAAAAAGAAAATACATCATCTGAACGGCTCGTTAAAACCTCTACATCTAGAGTTTCTAAAACTTCATTTCAAAATAAAAGAGGCCGTCCTAGGAAAAAGAAAGATACAAGTGAAAAAAGTGAGATCATGTGTGAAAGAAAAACGACGAGATCTGCCACTGCAGTCAAATATCCACAAAATAGGGATGCAAGCCCCTTTAACATTGGTGAGAAAGAGAAGACATCCTCAGTTTCTGCTCTATCAAGTTTCAAAAAGTCCAGATCAGGGAGGTTGCTTCTACCACCCTTAGAGTTTTGGCGTAACCAGATGCCGATTTACAATGCGGACCATGAGGTTACAGAAATTCAGGGAGGTGCATCTGTGGTTCATTAG 807 0.4287 MDNGFPPEVTNHFLFGFPDNWERYATDLFRNDSSIGTELGSDVPENVSAIEPEICSDGLEKSVPSSSKPLKEASGAHGKSHPEVECHDSGTTRGVNAAQGSGSFRRSTRLHNMKVCQQKKPASGVPQKHPEELNSPATPVQLQSLEKENTSSERLVKTSTSRVSKTSFQNKRGRPRKKKDTSEKSEIMCERKTTRSATAVKYPQNRDASPFNIGEKEKTSSVSALSSFKKSRSGRLLLPPLEFWRNQMPIYNADHEVTEIQGGASVVH 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30623g00004 268 MobiDBLite consensus disorder prediction 57 187 - -
Stsc30623g00004 268 Pfam SANTA (SANT Associated) 2 24 IPR015216 -
Stsc30623g00004 268 MobiDBLite consensus disorder prediction 134 168 - -
Stsc30623g00004 268 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 64 263 - -
Stsc30623g00004 268 MobiDBLite consensus disorder prediction 92 111 - -
Stsc30623g00004 268 MobiDBLite consensus disorder prediction 74 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30623g00004 Stsc-Chr30623 19555 25284 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc30623g00004 SANTA 0.00011 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30623g00004 - - gmx:100793717 251.136