Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30623g00003 ATGGCTGAGTCTACTTCAACTCCATCTACTTCTAACAACGCCAATTTATCTTCTTTCCAACCAACGGTTTCGTTATATGAGTGGTGGCTGGTTAAAGCTGAACATGACTTTGATGGAAAGCGGTTAGCCATCGGGGGCATTGCTTCAAGAAAGGAAGAAGCAGTGCGTGTCTTCATCACTGCACCGATTACCAAACGGCATGATCTGTTCTCTCTGGAGACTGCAGATGGAATTTATATTCTCATAAGAGGTTTCATTGATGAGAAGCGCACCATGGATAATGGTTTTCCTCCCGAGGTTACCAACCATTTCTTATTTGGTTTCCCTGATAACTGGGAAAGGTATGCCACAGATTTGTTTAGGAATGACTCAAGTATTGGCACTGAATTGGGTAGTGATGTTCCTGAAAATGTATCAGCAATTGAGCCTGAGATCTGTTCTGATGGTCTTGAAAAATCTGTCCCATCTTCTTCGAAACCCTTAAAAGAAGCATCTGGAGCTCATGGGAAGTCACATCCTGAAGTTGAATGCCATGATTCTGGCACTACAAGGGGGGTTAATGCTGCTCAAGGCAGTGGCAGCTTTAGACGTAGCACCAGATTGCACAACATGAAAGTCTGTCAGCAGAAGAAGCCTGCTTCTGGGGTTCCTCAGAAGCATCCAGAAGAACTGAACAGTCCAGCGACGCCAGTTCAGTTACAATCTCTGGAAAAAGAAAATACATCATCTGAACGGCTCGTTAAAACCTCTACATCTAGAGTTTCTAAAACTTCATTTCAAAATAAAAGAGGCCGTCCTAGGAAAAAGAAAGATACAAGTGAAAAAAGTGAGATCATGTGTGAAAGAAAAACGACGAGATCTGCCACTGCAGTCAAATATCCACAAAATAGGGATGCAAGCCCCTTTAACATTGGTGAGAAAGAGAAGACATCCTCAGTTTCTGCTCTATCAAGTTTCAAAAAGTCCAGATCAGGGAGGTTGCTTCTACCACCCTTAGAGTTTTGGCGTAACCAGATGCCGATTTACAATGCGGACCATGAGGTTACAGAAATTCAGGGAGGTGCATCTGTGGTTCATTAG 1080 0.4324 MAESTSTPSTSNNANLSSFQPTVSLYEWWLVKAEHDFDGKRLAIGGIASRKEEAVRVFITAPITKRHDLFSLETADGIYILIRGFIDEKRTMDNGFPPEVTNHFLFGFPDNWERYATDLFRNDSSIGTELGSDVPENVSAIEPEICSDGLEKSVPSSSKPLKEASGAHGKSHPEVECHDSGTTRGVNAAQGSGSFRRSTRLHNMKVCQQKKPASGVPQKHPEELNSPATPVQLQSLEKENTSSERLVKTSTSRVSKTSFQNKRGRPRKKKDTSEKSEIMCERKTTRSATAVKYPQNRDASPFNIGEKEKTSSVSALSSFKKSRSGRLLLPPLEFWRNQMPIYNADHEVTEIQGGASVVH 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30623g00003 359 Pfam SANTA (SANT Associated) 23 115 IPR015216 -
Stsc30623g00003 359 MobiDBLite consensus disorder prediction 225 259 - -
Stsc30623g00003 359 MobiDBLite consensus disorder prediction 148 287 - -
Stsc30623g00003 359 MobiDBLite consensus disorder prediction 183 202 - -
Stsc30623g00003 359 MobiDBLite consensus disorder prediction 165 179 - -
Stsc30623g00003 359 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 155 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30623g00003 Stsc-Chr30623 19555 25297 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc30623g00003 SANTA 2.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30623g00003 - - gsj:114370329 360.533