Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30623g00002 ATGCTTGTTTCGTTATATGAGTGGTGGCTGGTTAAAGCTGAACATGACTTTGATGGAAAGCGGTTAGCCATCGGGGGCATTGCTTCAAGAAAGGAAGAAGCAGTGCGTGTCTTCATCACTGCACCGATTACCAAACGGCATGATCTGTTCTCTCTGGAGACTGCAGATGGAATTTATATTCTCATAAGAGGTTTCATTGATGAGAAGCGCACCATGGATAATGGTTTTCCTCCCGAGGTTACCAACCATTTCTTATTTGGTTTCCCTGATAACTGGGAAAGGTATGCCACAGATTTGTTTAGGAATGACTCAAGTATTGGCACTGAATTGGGTAGTGATGTTCCTGAAAATGTATCAGCAATTGAGCCTGAGATCTGTTCTGATGGTCTTGAAAAATCTGTCCCATCTTCTTCGAAACCCTTAAAAGAAGCATCTGGAGCTCATGGGAAGTCACATCCTGAAGTTGAATGCCATGATTCTGGCACTACAAGGGGGGTTAATGCTGCTCAAGGCAGTGGCAGCTTTAGACGTAGCACCAGATTGCACAACATGAAAGTCTGTCAGCAGAAGAAGCCTGCTTCTGGGGTTCCTCAGAAGCATCCAGAAGAACTGAACAGTCCAGCGACGCCAGTTCAGTTACAATCTCTGGAAAAAGAAAATACATCATCTGAACGGCTCGTTAAAACCTCTACATCTAGAGTTTCTAAAACTTCATTTCAAAATAAAAGAGGCCGTCCTAGGAAAAAGAAAGATACAAGTGAAAAAAGTGAGATCATGTGTGAAAGAAAAACGACGAGATCTGCCACTGCAGTCAAATATCCACAAAATAGGGATGCAAGCCCCTTTAACATTGGTGAGAAAGAGAAGACATCCTCAGTTTCTGCTCTATCAAGTTTCAAAAAGTCCAGATCAGGGAGGTTGCTTCTACCACCCTTAGAGTTTTGGCGTAACCAGATGCCGATTTACAATGCGGACCATGAGGTTACAGAAATTCAGGGAGGTGCATCTGTGGTTCATTAG 1020 0.4333 MLVSLYEWWLVKAEHDFDGKRLAIGGIASRKEEAVRVFITAPITKRHDLFSLETADGIYILIRGFIDEKRTMDNGFPPEVTNHFLFGFPDNWERYATDLFRNDSSIGTELGSDVPENVSAIEPEICSDGLEKSVPSSSKPLKEASGAHGKSHPEVECHDSGTTRGVNAAQGSGSFRRSTRLHNMKVCQQKKPASGVPQKHPEELNSPATPVQLQSLEKENTSSERLVKTSTSRVSKTSFQNKRGRPRKKKDTSEKSEIMCERKTTRSATAVKYPQNRDASPFNIGEKEKTSSVSALSSFKKSRSGRLLLPPLEFWRNQMPIYNADHEVTEIQGGASVVH 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30623g00002 339 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 135 334 - -
Stsc30623g00002 339 MobiDBLite consensus disorder prediction 145 159 - -
Stsc30623g00002 339 MobiDBLite consensus disorder prediction 205 239 - -
Stsc30623g00002 339 MobiDBLite consensus disorder prediction 163 182 - -
Stsc30623g00002 339 MobiDBLite consensus disorder prediction 128 258 - -
Stsc30623g00002 339 Pfam SANTA (SANT Associated) 3 95 IPR015216 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30623g00002 Stsc-Chr30623 19555 25297 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc30623g00002 SANTA 1.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30623g00002 - - gsj:114370329 348.977