Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30619g00005 ATGGATTGGGGTTTTGTGCATAAAACGTGGGATAAGTGGGCTTCCTCTAACATTGGTCATTCTGGTCACCCTTTAAAAGCTGCTTTCTTGATTAATTATGACCCAACTGGACCTTCTCGCTTGTTATCTACCATTGCTGAACAAGAAGGAATCAAAGCCAACCCCATGGAGTTGACTCACTTTCTAGACTTCATCAAGCGCAATCAGCTCCAATCAGAAACCTTCATCATTGGCTCCAATGAGTACTTGGTGACCTCAATTCACGAGAATTGGTTTAGTGGAAGGTGCATAAACACATCAAAGCCTGCTGGTGAAGGTGCAATTGTTATTCAAACGGCAGCATATATCTTAGTTGCTTTGTATGAAGGTTCCATTGGTCCGGCATCTCGTGCTATGGCGGCTGCTGATCAATTAACTTGGCAATTAGGACGGAAAAATCTTTAG 444 0.4302 MDWGFVHKTWDKWASSNIGHSGHPLKAAFLINYDPTGPSRLLSTIAEQEGIKANPMELTHFLDFIKRNQLQSETFIIGSNEYLVTSIHENWFSGRCINTSKPAGEGAIVIQTAAYILVALYEGSIGPASRAMAAADQLTWQLGRKNL 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30619g00005 147 Pfam Profilin 9 142 IPR005455 GO:0003779
Stsc30619g00005 147 Gene3D Dynein light chain 2a, cytoplasmic 9 146 - -
Stsc30619g00005 147 PANTHER OS05G0241400 PROTEIN 1 147 - -
Stsc30619g00005 147 SUPERFAMILY Profilin (actin-binding protein) 10 133 IPR036140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30619g00005 Stsc-Chr30619 24869 26416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30619g00005 1 147 Carbohydrate Esterase AT4G19410 66.892 7.72e-70 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30619g00005 - K19882 gmx:100811973 281.952