Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30619g00002 ATGGAACAAGAAGAATATACAAAGGAGCAGATCAATTGGAGCTACATTGAATTTGTTGACAACCAAGATGTTTTGGACCTTATTGAAAAGAAACCTGGTGGAATCATTGCTCTCCTTGATGAAGCTTGCATGTTTCCAAAGTCAACACATGAAACGTTTTCAAACAAACTGTATCAGACATTTAAGACTCACAAGCGCTTCATTAAGCCAAAGTTGTCTCGGACAGATTTCACTATTTCACATTATGCAGGAGAGGTGCAATACCAGTCTGATCAATTTCTGGACAAAAACAAGGACTATGTTGTCCCTGAACATCAAGATTTGCTGGGTGCTTCCAAATGTTCTTTTGTAGCTGGCCTTTTTCCTCCACTACCAGAAGAGACATCAAAATCTTCCAAATTTTCTTCGATTGGTTCTCGTTTTAAGCTACAACTGCAGTCACTAATGGACACACTAAACTCTACAGAGCCTCACTACATTAGATGTGTGAAGCCAAACAACCTCCTGAAGCCTGCAATATTTGAGAATCAAAACATTATGCAACAACTTCGTTGTGGTGGTGTTTTAGAGGCAATCAGAATTAGTTGCGCTGGCTACCCTACTCGGCGTGCTTTCTTTGAATTTATGCATCGATTTAACATCCTCGCTCCGGAGATCACAGATGCACACAACGATGAGAAGGTTGTTTGCCAAAAGATTCTTGAAAAAATGGGGCTTGCTGGATATCAGATTGGAAAAACAAAGGTATTCCTAAGGGCAGGTCAGATGGCTGAACTAGATGCTCGGAGGGCTCAAGTACTCAGTAATGCAGCAAAAACTATCCAACGGCGAGTACGAACCTATCAAGCTCGTCAACATTATCTTTCATTGCGGATGAAGACCATATTCGTGCAGTCTGTGTGTAGAGGTGAGGTATTTTACAAGTGA 927 0.411 MEQEEYTKEQINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSNKLYQTFKTHKRFIKPKLSRTDFTISHYAGEVQYQSDQFLDKNKDYVVPEHQDLLGASKCSFVAGLFPPLPEETSKSSKFSSIGSRFKLQLQSLMDTLNSTEPHYIRCVKPNNLLKPAIFENQNIMQQLRCGGVLEAIRISCAGYPTRRAFFEFMHRFNILAPEITDAHNDEKVVCQKILEKMGLAGYQIGKTKVFLRAGQMAELDARRAQVLSNAAKTIQRRVRTYQARQHYLSLRMKTIFVQSVCRGEVFYK 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30619g00002 308 Gene3D Kinesin motor domain 126 198 IPR036961 -
Stsc30619g00002 308 ProSiteProfiles Myosin motor domain profile. 1 264 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc30619g00002 308 Pfam Myosin head (motor domain) 2 252 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc30619g00002 308 SMART MYSc_2a 1 265 IPR001609 GO:0003774|GO:0005524|GO:0016459
Stsc30619g00002 308 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 306 IPR027417 -
Stsc30619g00002 308 ProSiteProfiles IQ motif profile. 267 294 IPR000048 GO:0005515
Stsc30619g00002 308 Gene3D - 199 265 - -
Stsc30619g00002 308 Gene3D - 1 124 - -
Stsc30619g00002 308 PANTHER MYOSIN 1 298 - -
Stsc30619g00002 308 Pfam IQ calmodulin-binding motif 269 287 IPR000048 GO:0005515
Stsc30619g00002 308 Gene3D - 266 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30619g00002 Stsc-Chr30619 5388 7171 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30619g00002 1 305 Myosins gene family AT1G08730 82.295 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30619g00002 K10357 - gmx:100816792 537.724