Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30607g00002 ATGGAGCCCAAGATTGGAGACTTTGGGCTCGAAAGGATTGTGACGGGTGATACTAGCTACAAAGCTGGAGGATCAGCCCGAATTTTTGGGAGCAAGAGATCAACAGCATCACGTGATAGCTTTCAAGACATGACACTTGGGCCTAGCCCAAGCCCAAGCCCAAGTTCAATTAGTGGTGTGTCTCCTTACCATGCTCCCGAGTCGCTCAGGAACCTTAAGCCTAGTCCAAAGTGGGACGTGTACTCTTTTGGGGTCATGTTTCTTGAACTCTTATCTGGGAAGGTTGTTGTGTTGGATGATATGGGCCAAGGGCCCGGGCTTTTAGCTGAGGACAAGAACCGGGCTTTGCGGATGGCTGATGCAGCTATAAGACCTGAGATGGAGGGTAAGGAAGAGGCTTTGTTGGCTTGCTTCAAGTTAGGGAGCACAAGACTCTCTTGTTCCGTCCCTCCGAACGATATTTCTGATGAGGTTCAAGTACTGGTGGTACAACAAGAAAGACAACTAAGTCCTGAGCAGATTGAGGAACCAAAAGCCTTAGTTGTGACTAGCTTTGGGCGTGGAAATTCTGGGCAACAGACCTCAAATCAAGGCATGAATAAGACATTCAACAAACTAAAGTTTGGCATAAATAACACAAATATGTGTACATTTTGTGGCAAGCATGGCCATAGTGTGGATGCTTGTTTCAAGAAACATGGTTATCCCTCCAAATCAGAAGAAATGAGGATCCACAGCTGCTAA 744 0.4664 MEPKIGDFGLERIVTGDTSYKAGGSARIFGSKRSTASRDSFQDMTLGPSPSPSPSSISGVSPYHAPESLRNLKPSPKWDVYSFGVMFLELLSGKVVVLDDMGQGPGLLAEDKNRALRMADAAIRPEMEGKEEALLACFKLGSTRLSCSVPPNDISDEVQVLVVQQERQLSPEQIEEPKALVVTSFGRGNSGQQTSNQGMNKTFNKLKFGINNTNMCTFCGKHGHSVDACFKKHGYPSKSEEMRIHSC 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30607g00002 247 MobiDBLite consensus disorder prediction 31 62 - -
Stsc30607g00002 247 ProSiteProfiles Protein kinase domain profile. 1 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30607g00002 247 MobiDBLite consensus disorder prediction 31 65 - -
Stsc30607g00002 247 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 162 - -
Stsc30607g00002 247 Gene3D Transferase(Phosphotransferase) domain 1 1 174 - -
Stsc30607g00002 247 SUPERFAMILY Protein kinase-like (PK-like) 2 99 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30607g00002 Stsc-Chr30607 11618 13029 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30607g00002 1 161 Receptor kinase-like Gene Family AT5G67280 59.639 1.15e-49 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Stsc30607g00002 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30607g00002 - - ahf:112799685 256.144