Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30604g00005 ATGTTTTTCTTTGAAGTTCCGTTTGCATTGGGTGAGCTTAGGATTGGATTCTATAGAAGCAGCTGCCCAAAAGCAGAGTTGATTGTGAAGCAACAAGTTCAGAGGCTATTCAACCGTGACAAATCCATAACCCCTGCATTGCTTCGTATGCATTTCCATGACTGCTTTGTCAGGGGTTGTGATGCATCCATACTCATAGACTCAGCAACCAACACCTCAGAGAAAAACGCAGGCGCTAATAGAAGCGTTCGGGGATACGATTTCATTGATCACCTCAAACAAATCCTGGAATCTGAATGCCCTTCAACAGTTTCATGCGCAGATATCATAACACTCGCCACCAGAGACGCCGTCGCCTTATCCGGCGGCCCCAAATACGCCGTCCCCACCGGTCGCCGTGACGGACTAGTATCCACAACCACCGACGTCGACTTACCGGGAGGAAGTCAGTCGGTGCAAACTGTATCACAATTCTTCGCAGAGAAGGGAATGACGGTGGAGGAAATGGTGGTTCTCTTGGGTGGTGGACACAGCATTGGCGTTGCTCACTGCTTTTCGTTTCAGAGAAGGCTTTCGAGTTTTAATGGGACACCTGATCCTACAATGGATCCTGCGTTGGATTCTGAGCTCGTGAAGATTTGCAACTCAACGGTAGGAGGAAGAGTTCAAGATTTTCTGCCTCCGAGTGCGTTCTTGGATCAGAACACTTCGTTTGTACTTGATAACGAGATATATAAGCAGATTCTTTTGAAGAAGGGTGTGTTGAAGATTGACCAGGAGCTTGCTTTGGATACTTCTACTAAAGATTTTGTGGCTAGTTTTGCTGCTAATGGTGATGAGTTTCAAAAGAGTTTTGCAAATGCAATGGTAAAGATGGGGAAGATCGAGGTTCTGGTTGGGAATCAAGGAGAGATTCGCAAAAATTGTAGGGCCTTTAACTAA 942 0.4618 MFFFEVPFALGELRIGFYRSSCPKAELIVKQQVQRLFNRDKSITPALLRMHFHDCFVRGCDASILIDSATNTSEKNAGANRSVRGYDFIDHLKQILESECPSTVSCADIITLATRDAVALSGGPKYAVPTGRRDGLVSTTTDVDLPGGSQSVQTVSQFFAEKGMTVEEMVVLLGGGHSIGVAHCFSFQRRLSSFNGTPDPTMDPALDSELVKICNSTVGGRVQDFLPPSAFLDQNTSFVLDNEIYKQILLKKGVLKIDQELALDTSTKDFVASFAANGDEFQKSFANAMVKMGKIEVLVGNQGEIRKNCRAFN 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30604g00005 313 PRINTS Haem peroxidase superfamily signature 122 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30604g00005 313 PRINTS Haem peroxidase superfamily signature 104 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30604g00005 313 PRINTS Haem peroxidase superfamily signature 169 184 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30604g00005 313 PRINTS Haem peroxidase superfamily signature 44 58 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30604g00005 313 PRINTS Haem peroxidase superfamily signature 233 248 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30604g00005 313 Pfam Peroxidase 29 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30604g00005 313 ProSiteProfiles Plant heme peroxidase family profile. 12 313 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30604g00005 313 SUPERFAMILY Heme-dependent peroxidases 13 313 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc30604g00005 313 PRINTS Plant peroxidase signature 84 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30604g00005 313 PRINTS Plant peroxidase signature 168 180 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30604g00005 313 PRINTS Plant peroxidase signature 231 246 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30604g00005 313 PRINTS Plant peroxidase signature 247 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30604g00005 313 PRINTS Plant peroxidase signature 46 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30604g00005 313 PRINTS Plant peroxidase signature 103 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30604g00005 313 PRINTS Plant peroxidase signature 122 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30604g00005 313 PRINTS Plant peroxidase signature 22 41 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30604g00005 313 PRINTS Plant peroxidase signature 287 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30604g00005 313 FunFam Peroxidase 16 161 - -
Stsc30604g00005 313 PANTHER - 11 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30604g00005 313 CDD secretory_peroxidase 12 312 IPR033905 GO:0004601|GO:0042744
Stsc30604g00005 313 Gene3D - 16 313 - -
Stsc30604g00005 313 Gene3D Peroxidase, domain 2 146 292 - -
Stsc30604g00005 313 ProSitePatterns Peroxidases active site signature. 44 55 IPR019794 GO:0004601
Stsc30604g00005 313 FunFam Peroxidase 146 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30604g00005 Stsc-Chr30604 44326 45870 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30604g00005 1 313 Peroxidase AT4G26010 55.096 1.90e-118 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30604g00005 K00430 - gmx:100777946 399.823