Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc305g00002 ATGTTGCTTCCTACTCTTTTCATTATTGTAGTGTCCCTTCTCTTGGGCACTTCAGATTCCAGACTAACGCTGGACTACTACGCCAAGACCTGTCCTCAGTTCAGCCAGATCATCCAAGACACCATCACCAACAAGCAAATCGCCAGTCCCACTACCGCCGGCGCCACCATCCGCCTCTTCCTCCACGATTGCCTCGCCAACGGCTGCGACGGCTCCATCCTCATTTCATCCACCCCTTTCAACAAAGCCGAGCGCGACAACGACATCAACCTCTCCCTTCCCGGTGATGGCTTCGATGTCATCGTTCGGGCCAAAACTGCTCTCGAGCTCGCCTGCCCGAACACCGTCTCCTGCGCCGACATCCTCGCAGTCGCCACCCGCGACCTCGTCACCATGGCCGGCGGCCCTTACTATCATGTCTACCTCGGCCGCCGCGATAGTCGCGTCTCGAAATCCTCCGACATCGACGGCAACCTCCCTAAGCCAACAATGCCGATGTCACAGATCATCGAGATCTTCGAAAAAAGAGGATTCTCCATTGAGGAAATGGTGGCACTCACCGGAGCCCACACCATTGGATTCTCACACTGTAATCAAATCAGCAAAGACCTATATAATTACAGCAAGTTCTCGGAGTACGACCCTCAGTACAACCCTCGCTATGCACAAGGGCTGCAGAAGGCGTGCTCCGATTACCAGAAGAACCCCACGCTGTCGGTGTTCAATGACGTAATGACACCAAACAAGTTCGATAATGTTTACTTCCAGAACCTTCCGAAGGGCTTAGGAGTTCTTAAATCGGACCGTGGCCTCTTCGGGGACCCGAGGACGAGGCCGTTTGTTGAGAAATTCGCTGCTGATGAGAGCAAGTTCTTCCAAGCTTTTGCCAGTGCCATGCAGAAGCTCAGCCTTGTTGGGATCCAAACGGGAAGGAGGGGTGAGATCAGGCACAGGTGTGACCAGATTAATTAG 972 0.537 MLLPTLFIIVVSLLLGTSDSRLTLDYYAKTCPQFSQIIQDTITNKQIASPTTAGATIRLFLHDCLANGCDGSILISSTPFNKAERDNDINLSLPGDGFDVIVRAKTALELACPNTVSCADILAVATRDLVTMAGGPYYHVYLGRRDSRVSKSSDIDGNLPKPTMPMSQIIEIFEKRGFSIEEMVALTGAHTIGFSHCNQISKDLYNYSKFSEYDPQYNPRYAQGLQKACSDYQKNPTLSVFNDVMTPNKFDNVYFQNLPKGLGVLKSDRGLFGDPRTRPFVEKFAADESKFFQAFASAMQKLSLVGIQTGRRGEIRHRCDQIN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc305g00002 323 CDD secretory_peroxidase 22 322 IPR033905 GO:0004601|GO:0042744
Stsc305g00002 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Stsc305g00002 323 FunFam Peroxidase 25 173 - -
Stsc305g00002 323 FunFam Peroxidase 160 302 - -
Stsc305g00002 323 Pfam Peroxidase 42 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc305g00002 323 PANTHER - 7 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc305g00002 323 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc305g00002 323 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc305g00002 323 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc305g00002 323 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc305g00002 323 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc305g00002 323 Gene3D - 25 323 - -
Stsc305g00002 323 ProSiteProfiles Plant heme peroxidase family profile. 21 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc305g00002 323 SUPERFAMILY Heme-dependent peroxidases 22 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc305g00002 323 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc305g00002 323 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc305g00002 323 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc305g00002 323 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc305g00002 323 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc305g00002 323 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc305g00002 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc305g00002 323 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc305g00002 323 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc305g00002 323 Gene3D Peroxidase, domain 2 160 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc305g00002 Stsc-Chr305 49916 50887 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc305g00002 18 323 Peroxidase AT5G40150 65.359 8.78e-155 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc305g00002 K00430 - cave:132180976 506.523