Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30595g00010 ATGGGATTATTTTCTCCTTTTGGTCTTCAACAACTTGTTACTTCTTTTGCAGTTGTTGCCACATTATTGAGCATTGTTGGCACAGCACAAGAGGGTCCTCTAAATTCCTTAACATATTCTGGAAGCCATAGATTTATCCATTCCCACATCAAAGAGCAAGAAAAAATTAATAATAATAATAATGATTCTCCTATTGCTTCAGTCCTGCAAGATCAAGGCAACGATTCTTCATCATCAGATAGTAAAAGTAGTAGTCACAATAACACTCCCACTTTGTTGGTAATCCTCAATGTGGTTCTTCTTCTTGCTATCATACTGCTCTTGATGCTATACTACAACACAACAAGAAAACTCAACAAGATGATGAAGGTGCAGGCTCACAACAATAACAACAAATCCGTTGCTCTCAAAGAGGTGGACAAAGACGATGTTGAGAGCAGTACAGTTTCGGAGAAGAAGATAGAGATAGGAGAAGGTACAAAGATGACGGTGGAGGACAGAAAAGAGCTCATGTTCTTCAACGGCAATAACAAGACAAGGTTTCAGATGGGGCAGCTTCTAAGGGCTTCAGCAGAGACACTGGGACAGGGAACCATGGGGAACAGTTACAAGGCCATGATGCATGATGGACCTACCATTGTTGTCAAGAGGCTCAGGGACTTGAAACCTTTCACTGAGAAAGAATTCGCAACACAGCTCCGTGTGATTGCAGGGATGCAGCACCCTAATTTGTTGCCATTGCTTGCTTACTACCATTCAAGAGATGAGAAGCTTCTCCTCTTCAAATATGCACAGAATGGGAACCTTTTCTCTAGGCTTCATGAAGGAAGAGATGGAAGCAGGGCAGCATTTCGATGGAACTCAAGGCTATGTATTGCAAAATCCGTAGCTCGAGCAATGGAGTACCTGCACAATAACACCAAGAACCCTAACATTGTCCCCCATGGCAACCTCAAGACCACAAACGTCCTCATAGACGAAAACGACGTCGCCATGGTGTCCGACTACGGGCTCTCCGCCCTAATTGCGCAACCTATCGCCGTTCAGCGGATGGTGATTTACAAGTCACCGGAATACGCGCAATCGAGGCGGGTGACAGCGCAATCCGATGTGTGGAGCTACGGATGCCTCCTGATTGAGCTGTTAACGGGCAAAATATCTGCGTGCTCTGCTCCACATGGATCGAACGGTGTTGATCTGTGCGGTTGGGTGCATAGAGCGGTGAGGGAGGAGTGGACGGCTGAGATCTTTGATAAAGAGATCTATAGGCAGAAGAATGCGCAGAGTGGGATGATACGGTTGCTTGAGATTGCCATGCTTTGTACGGAGAGGTTCCCGGAGAACCGGCCTGCGATGAGCCAGGTTGTTAGGGAGGTTGAGAAGATACAGGCGGTGGCGGCGGCGTCGGAGGTGGCCGATGAGGATGATCTGTCTGCTGATAGGTCTTTCACTGATGATTCTCTTTCTATGTATTCAACCAGTCACTCTGGAATTCTTGCAGATTAA 1506 0.4635 MGLFSPFGLQQLVTSFAVVATLLSIVGTAQEGPLNSLTYSGSHRFIHSHIKEQEKINNNNNDSPIASVLQDQGNDSSSSDSKSSSHNNTPTLLVILNVVLLLAIILLLMLYYNTTRKLNKMMKVQAHNNNNKSVALKEVDKDDVESSTVSEKKIEIGEGTKMTVEDRKELMFFNGNNKTRFQMGQLLRASAETLGQGTMGNSYKAMMHDGPTIVVKRLRDLKPFTEKEFATQLRVIAGMQHPNLLPLLAYYHSRDEKLLLFKYAQNGNLFSRLHEGRDGSRAAFRWNSRLCIAKSVARAMEYLHNNTKNPNIVPHGNLKTTNVLIDENDVAMVSDYGLSALIAQPIAVQRMVIYKSPEYAQSRRVTAQSDVWSYGCLLIELLTGKISACSAPHGSNGVDLCGWVHRAVREEWTAEIFDKEIYRQKNAQSGMIRLLEIAMLCTERFPENRPAMSQVVREVEKIQAVAAASEVADEDDLSADRSFTDDSLSMYSTSHSGILAD 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30595g00010 501 Gene3D Transferase(Phosphotransferase) domain 1 264 486 - -
Stsc30595g00010 501 ProSiteProfiles Protein kinase domain profile. 188 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30595g00010 501 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 73 465 IPR046959 -
Stsc30595g00010 501 MobiDBLite consensus disorder prediction 57 87 - -
Stsc30595g00010 501 MobiDBLite consensus disorder prediction 56 87 - -
Stsc30595g00010 501 Gene3D Phosphorylase Kinase; domain 1 152 263 - -
Stsc30595g00010 501 Pfam Protein tyrosine and serine/threonine kinase 192 458 IPR001245 GO:0004672|GO:0006468
Stsc30595g00010 501 SUPERFAMILY Protein kinase-like (PK-like) 192 463 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30595g00010 Stsc-Chr30595 38214 39851 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30595g00010 134 481 Receptor kinase-like Gene Family AT5G58300 39.943 5.39e-80 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Stsc30595g00010 PK_Tyr_Ser-Thr 3.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30595g00010 - - cam:101502784 525.783