Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30595g00009 ATGGAGTGTGGTTTCTATCTAGTGTTAGCTTTGGTTTCATTGGGCGTTGTTAACAGCGTAGTGCATGGGCAAGGCACGCGTGTAGGGTTCTACTCCAGTACGTGCCCTGGAGTGGAGTCCATTGTTAGGTCGACGGTTCAGTCTCACCTTAACTCTGACCTTACCTTGGCTGCTGGCCTCCTCAGGATGCACTTCCATGACTGCTTTGTTCATGGTTGCGATGCTTCCCTCCTCATTGATGGCACCAACACTGAGAAGACTGCGCCACCCAACATTGGACTCAGAGGCTTTGAGGTCATTGATCATGCAAAGACGCAGCTCGAGGCTGCCTGCCCTAATGTTGTGTCTTGTGCTGATATCCTTGCCCTTGCTGCCCGTGATTCCGTTGTTCTGAGTGGTGGAGCTAGTTGGCAAGTGCCAACCGGACGCAGAGATGGGCTAGTGTCAAGTGCCTTCGATGTCAAGTTGCCGGGACCGGGTGATTCTGTTGACGTGCAGAAACACAAGTTTTCGGCATTGGGTCTCAACACAAAAGACCTTGTTACCCTTGTTGGTGGGCACACCATTGGCACTACAAGTTGTCAGCTTTTGAGCAGCAGGCTATACAATTTCAACGGAACAAATGGTCCAGACCCTACCATTGACCCTTCATTTCTTCCTCAGTTAAAGGCTCTTTGCCCTCAGAATGGTGGAGCTTCTACTAAGAGAGTGCCTCTAGATAACGGTAGCCAAACCAAATTTGATACATCTTACTTTAATAATGTGAGGAGGGGCAGGGGTATTCTGCAATCTGATCAGGCACTTTGGACTGATCCTTCCACAAAGCCATTTGTGCAGAGCTACTCACTTGGATCAACCTTTAATGTTGACTTTGGAAATTCTATGGTCAAGATGGGCAACATTGGTGTCAAGACAGGCTCTGATGGTGAAATCCGCAAGAAATGTTCCGCTTTTAATTAA 960 0.4844 MECGFYLVLALVSLGVVNSVVHGQGTRVGFYSSTCPGVESIVRSTVQSHLNSDLTLAAGLLRMHFHDCFVHGCDASLLIDGTNTEKTAPPNIGLRGFEVIDHAKTQLEAACPNVVSCADILALAARDSVVLSGGASWQVPTGRRDGLVSSAFDVKLPGPGDSVDVQKHKFSALGLNTKDLVTLVGGHTIGTTSCQLLSSRLYNFNGTNGPDPTIDPSFLPQLKALCPQNGGASTKRVPLDNGSQTKFDTSYFNNVRRGRGILQSDQALWTDPSTKPFVQSYSLGSTFNVDFGNSMVKMGNIGVKTGSDGEIRKKCSAFN 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30595g00009 319 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Stsc30595g00009 319 PANTHER PEROXIDASE 25-RELATED 12 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30595g00009 319 CDD secretory_peroxidase 27 318 IPR033905 GO:0004601|GO:0042744
Stsc30595g00009 319 Gene3D Peroxidase, domain 2 157 298 - -
Stsc30595g00009 319 FunFam Peroxidase 29 160 - -
Stsc30595g00009 319 ProSiteProfiles Plant heme peroxidase family profile. 25 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30595g00009 319 SUPERFAMILY Heme-dependent peroxidases 27 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc30595g00009 319 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30595g00009 319 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30595g00009 319 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30595g00009 319 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30595g00009 319 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30595g00009 319 Pfam Peroxidase 42 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc30595g00009 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Stsc30595g00009 319 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30595g00009 319 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30595g00009 319 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30595g00009 319 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30595g00009 319 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30595g00009 319 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30595g00009 319 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30595g00009 319 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30595g00009 319 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc30595g00009 319 FunFam Peroxidase 157 298 - -
Stsc30595g00009 319 Gene3D - 29 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30595g00009 Stsc-Chr30595 35457 36640 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30595g00009 7 319 Peroxidase AT5G64120 62.037 6.29e-139 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30595g00009 K00430 - gmx:100820620 446.817