Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30595g00005 ATGGATTCTTTGTTGTTGAGCTCGAATCCAAAGCCATTTCAGTGCCTTCCATGCCTCTCAACCAAGCATCAAAGGCAGTATTCTCATATGATGAATGTTTCTTGCAGAGCCACAAAGGTGGAATGTGAGAGCAACTTCTACAAAGTTCTGAGTGTTAGTCCAAAGAGTGCAACAATGGATGAGATCAAGAGAGCTTATAGATCCATGGCTCTTCAGTACCATCCAGATGTGTGCCATGATCCTTCCATGAAGGAGGAGTCAAATAAGATGTTTGTGCAGTTGAATGCAGCTTATGAGACCTTGTCCAACCCCATGCTTAGAGCACAGTATGATACTGAATTAGGTTTGAGAAATAATAATCAAGTGTTGATGAGTGTTGGTGATGATTCTGAAACTTGTTTGAGGAATTTGTGGGAGAAGGAGGAACATGAGCAAGTGGTTGTTGAATTGAAGACAAGGTCCCGGAGACGCATGGAACAAAAGGGCAACAGAATGAGGACACAAACCAGAGGAAAAGACAGGAACTGA 528 0.4261 MDSLLLSSNPKPFQCLPCLSTKHQRQYSHMMNVSCRATKVECESNFYKVLSVSPKSATMDEIKRAYRSMALQYHPDVCHDPSMKEESNKMFVQLNAAYETLSNPMLRAQYDTELGLRNNNQVLMSVGDDSETCLRNLWEKEEHEQVVVELKTRSRRRMEQKGNRMRTQTRGKDRN 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30595g00005 175 PRINTS DnaJ domain signature 66 81 IPR001623 -
Stsc30595g00005 175 PRINTS DnaJ domain signature 48 66 IPR001623 -
Stsc30595g00005 175 PRINTS DnaJ domain signature 86 106 IPR001623 -
Stsc30595g00005 175 MobiDBLite consensus disorder prediction 153 175 - -
Stsc30595g00005 175 CDD DnaJ 45 103 IPR001623 -
Stsc30595g00005 175 Gene3D DnaJ domain 30 131 IPR036869 -
Stsc30595g00005 175 ProSiteProfiles dnaJ domain profile. 45 114 IPR001623 -
Stsc30595g00005 175 ProSitePatterns Nt-dnaJ domain signature. 91 110 IPR018253 -
Stsc30595g00005 175 Pfam DnaJ domain 45 111 IPR001623 -
Stsc30595g00005 175 SMART dnaj_3 44 106 IPR001623 -
Stsc30595g00005 175 SUPERFAMILY Chaperone J-domain 39 110 IPR036869 -
Stsc30595g00005 175 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 29 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30595g00005 Stsc-Chr30595 19913 20440 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30595g00005 47 112 C2H2 Transcription Factor Family AT1G74250 44.118 9.28e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30595g00005 - - aip:107631621 271.937