Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30588g00001 ATGGCCAAAGGTGGAACACCGTGGGCTAATTTGTTAGACCCATTTTCAGTTCTTTATCACATTGCATATTCCGGTGAAGTTCCTGAGATTCCATGGTTTCTATCTGAAGAAGCAAGGGATTTCTTGGGAAAGTGTCTAAGGTGGAATCCACAAGAGAGGTGTACGGCTACTCAACTTCTTGATCATCCGTTTCTCTCTGTCGGAGAATTATCCAATTCCAAGAAGGTGGAATCAAATTCAAGAAGCTCATCATCATCGCCAACAAGTATTCTTGAGCATGGGTTTTGGAGTTGCGTGGAAGAAGGTTCTTCTAGAACTCACACAACAAGAACAACAACAACAACAAGCCTTGAGGATTTGCCACGTGGCAGGGTTAGAATGTTGGGTTTGTGTTCAGAGGAACCTTGTTGGGCATCATGGCATGAGGATGATGATGGGGACTGGATCACAATTAGAGGGAATGAGGGTGAGTCATGTGGAGAAGGGGTATTTGGTAATTTTGGATCAGAGACAGCTTCAATTAGTAATGGTGGTTTGGATCTGAAGTTGGTGGAAAGCAATGTGAGTGGTAGAATTTGTAGTAGTAGTAGTAGTAGTGGGCATTTTTGTCACCATAATAATAATATCATGTGTAGGGATGATAGTGTTGTGGTTAGAAATATAAATTCTGT 671 0.4188 MAKGGTPWANLLDPFSVLYHIAYSGEVPEIPWFLSEEARDFLGKCLRWNPQERCTATQLLDHPFLSVGELSNSKKVESNSRSSSSSPTSILEHGFWSCVEEGSSRTHTTRTTTTTSLEDLPRGRVRMLGLCSEEPCWASWHEDDDGDWITIRGNEGESCGEGVFGNFGSETASISNGGLDLKLVESNVSGRICSSSSSSGHFCHHNNNIMCRDDSVVVRNINSV 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30588g00001 224 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 109 - -
Stsc30588g00001 224 SUPERFAMILY Protein kinase-like (PK-like) 2 66 IPR011009 -
Stsc30588g00001 224 Gene3D Transferase(Phosphotransferase) domain 1 1 108 - -
Stsc30588g00001 224 ProSiteProfiles Protein kinase domain profile. 1 65 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30588g00001 Stsc-Chr30588 4892 5612 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30588g00001 1 154 MAP Kinase Kinase Kinase AT1G05100 42.038 2.18e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30588g00001 K20716 - gmx:100819665 166.392