Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30586g00002 ATGATAACGAGCGATCCATACGTTGTCTTGAAACTTGGTAAACAGACTGTTAAGACAAGCGTAATAAATAGTAATCTGAACCCAGTCTGGAATCAGGTGCTTATACTATCTGTTCCTGCGGATTTTGGCCCATTGGGTTTGAAGGTGTTTGATCAGGACATGTTTTCATCTGACGATTATATGGGAGAAGCAGAGGTAGATCTTCAGCCCCTGATTGCATCAGCAATGGCATTTGGAGATGCTGGAGTGCTTGAGGATATGCAGATAGGAAAATGGCTACAAACCCATGATAATGCACTTAAAGAAGATAGCACGGTTAACATAATTGATGGAAGGGTTAAACAAAAGGTATCACTTGTGCTCCAGAACGTTGAATGTGGAGAAATAGACTTAGAACTCGAGTGGATACCTCTATAG 417 0.4125 MITSDPYVVLKLGKQTVKTSVINSNLNPVWNQVLILSVPADFGPLGLKVFDQDMFSSDDYMGEAEVDLQPLIASAMAFGDAGVLEDMQIGKWLQTHDNALKEDSTVNIIDGRVKQKVSLVLQNVECGEIDLELEWIPL 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30586g00002 138 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 1 138 IPR044518 GO:0005096|GO:0005543
Stsc30586g00002 138 ProSiteProfiles C2 domain profile. 1 81 IPR000008 -
Stsc30586g00002 138 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 69 IPR035892 -
Stsc30586g00002 138 Gene3D C2 domain 2 138 IPR035892 -
Stsc30586g00002 138 Pfam C2 domain 3 74 IPR000008 -
Stsc30586g00002 138 SMART C2_3c 5 80 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30586g00002 Stsc-Chr30586 9621 10691 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30586g00002 1 138 C2H2 Transcription Factor Family AT4G05330 65.217 3.36e-65 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30586g00002 K12486 - qsu:112007580 223.016