Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30571g00005 ATGGCTGAGTCATTTATCTTCAGCATTGCTGAATCACTCATAGGGAAGCTCGTTTCTCAGGCTTTTGAAAGAGCTTCCCGAGTGCTGGGTGTGTACAAAGATCTCCTGGACTTAAAAGACACATTGTTGATCTTGAAAGCTGTGCTGGTGGATGCAGAGCAGAAACTGGAGCAGAATCATCAACTGCGCGAATGGCTAAAGCAGCTTAAGTGCGTGTTCTATGATGCCGAAGACTTAATAGATGAAGTCGAGTGTGAGGTAGCGCGAAGGGACTTAATCAAGAAACATGGTAGCACTAAAAGAAAGGTATGCCGATTCTTCTCAAGCTCTAATCCGGTTGCATTCCGATGTAGGATAGCTTATCAGATCAAAGAAATAAAAGATAAGCTAGACAAGGTTGCAGCTGATAGGAATAAGTTTGGCCTTGAGGTCATTACCTTTGAAAGACGTGTTGTGTCTAAGAGAGAAATGACTCACTCTTATGTGAGTGGTTCAGATGTGATAGGAAGGGATGATGATAAAAAGAATATCATTGACCTCTTGTTAAAGAAAAGCAATGAAGTTGGTGGTAAAAGTGTCTCTGTTGTCTCCATTGTGGGGTTGGGAGGGTTAGGAAAGACCACTCTAGCCAAGTATGTGTTTAATGATAAGACCATAGGTGATGCTTTTCCATTGAAGATATGGGTCTGTGTTTCCAATGAGTTTGACCTTAAGCAGATCATGATCAAAATCTTGAGTTCTGCTCCAACCTCGACTTCCCTTGGAAAATTAGAAGACTTAGGTGTCGAGCAACTGCAGAAACATCTCAGAGATGTTCTTGCTGATAAAAAATTCTTACTCGTCATGGACGATGTATGGAATAAAGATTGTGTCAAGTGGGAAGAGTTGAGGAACTTGTTACAAGTTGGTGCCCAAGGAAGTAAAGTTCTAGTAACTACTCGTAATCGCTTAATTGGTAGCATGATGAGCAATGGTTCCTTCTACAGTTTAGATGGCCTATCTCATCAAGACTCCTTGTCTTTGTTTCTCAAATGGGCATTTCGGCAAGGAGATGAAAAAAAGCATCCACCATTGATGGAAATTGGAGCAGACATTGTCAGAAAATGTGGTGGACTTCCATTGGCACTGAGAACGTTAGGGAGTTCATTGTTCTTAAAATTTGAAGTTAAAGAGTGGGAATTTGTCAGAGACAGTGAGATTTGGAATTTAGAACAAAAAGAAAGTGATGTCTTACCTGCACTCAAATTCAGCTATGATCAGCTACCTTCATATTTAAAACGATTTTTTGCATTGTTCTCCCTTTACCCAAAGGACTATCTCTTTGATAGTTCCTTTGGATCTTTACCTTGGGAGGCACTTGGTCTTCTTCCACAATCTAATACAGGTCAAACAGTGGATGATCTAATTAAAGAATGCCTATATGAGCTACAATCAATATCATTTCTTGAGAACTTTGTTGACACTGGTACTTCACTTGGATTCAAATTGCACGATTTAGTGCATGATCTTGCAATCTATGTTGCAAAGGATGAGTTCCAATGTGTAAATTCTCGTAATTACCGTATATCTGAGAGTGTCCGACATTTGTCATTTATGGAAACTGAATTGCTCGACCAAATTTCCATTCCCACTGGTGTTAGAACCATACTTTTCCCTGAAGAAGGTGTAGGAGCTGACAGTGAAAGTTTTATGAGTGCTATATCAAAATGCAAATACTTAAGGGTTTTGGACTTGAGTGATTCTAAATATGAAAGCTTGCCTCATGCAATCGGAAAGTTGAAACATCTAAGGTTCCTCTCACTATTGGGAAGTAAATACCTGAAGAAGCTCCCTAATTCATTGAGTGAACTCCAAAGTCTGCAAACTTTGATATTTGATGGATGCGTAAAGCTGCAAATACTGCCGAAACGATTAGGAAACCTGATTAACCTTCGGCGATTGATAATAGCCACAAAGCAATCTGACTTTCCAGAAAAAGAGATTTCAAAATTGACTTCTCTAGAAGTTCTAGGTGTATCTTGTGCGCCTTGA 2031 0.3968 MAESFIFSIAESLIGKLVSQAFERASRVLGVYKDLLDLKDTLLILKAVLVDAEQKLEQNHQLREWLKQLKCVFYDAEDLIDEVECEVARRDLIKKHGSTKRKVCRFFSSSNPVAFRCRIAYQIKEIKDKLDKVAADRNKFGLEVITFERRVVSKREMTHSYVSGSDVIGRDDDKKNIIDLLLKKSNEVGGKSVSVVSIVGLGGLGKTTLAKYVFNDKTIGDAFPLKIWVCVSNEFDLKQIMIKILSSAPTSTSLGKLEDLGVEQLQKHLRDVLADKKFLLVMDDVWNKDCVKWEELRNLLQVGAQGSKVLVTTRNRLIGSMMSNGSFYSLDGLSHQDSLSLFLKWAFRQGDEKKHPPLMEIGADIVRKCGGLPLALRTLGSSLFLKFEVKEWEFVRDSEIWNLEQKESDVLPALKFSYDQLPSYLKRFFALFSLYPKDYLFDSSFGSLPWEALGLLPQSNTGQTVDDLIKECLYELQSISFLENFVDTGTSLGFKLHDLVHDLAIYVAKDEFQCVNSRNYRISESVRHLSFMETELLDQISIPTGVRTILFPEEGVGADSESFMSAISKCKYLRVLDLSDSKYESLPHAIGKLKHLRFLSLLGSKYLKKLPNSLSELQSLQTLIFDGCVKLQILPKRLGNLINLRRLIIATKQSDFPEKEISKLTSLEVLGVSCAP 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30571g00005 676 SUPERFAMILY L domain-like 495 672 - -
Stsc30571g00005 676 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 431 IPR027417 -
Stsc30571g00005 676 PRINTS Disease resistance protein signature 272 286 - -
Stsc30571g00005 676 PRINTS Disease resistance protein signature 568 584 - -
Stsc30571g00005 676 PRINTS Disease resistance protein signature 195 210 - -
Stsc30571g00005 676 PRINTS Disease resistance protein signature 369 383 - -
Stsc30571g00005 676 Gene3D - 332 422 IPR042197 -
Stsc30571g00005 676 PANTHER DISEASE RESISTANCE PROTEIN RP 52 672 IPR044974 GO:0006952
Stsc30571g00005 676 FunFam Probable disease resistance protein At1g61300 149 326 - -
Stsc30571g00005 676 Pfam NB-ARC domain 172 419 IPR002182 GO:0043531
Stsc30571g00005 676 Gene3D - 147 326 IPR027417 -
Stsc30571g00005 676 Gene3D - 10 124 - -
Stsc30571g00005 676 Gene3D Ribonuclease Inhibitor 516 675 IPR032675 -
Stsc30571g00005 676 Pfam Rx N-terminal domain 11 98 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30571g00005 Stsc-Chr30571 28715 31837 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30571g00005 193 519 WRKY Transcription Factor Family AT5G45050 25.439 7.31e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30571g00005 - - gmx:100780033 698.353