Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30571g00002 ATGGCTGAGTCATTTATCTTTAGCATTGCTGAATCACTCATAGGGAAGCTTGTTTCTCAGGCTTTGGAAAGAGCTTCCCGAGTGGTGGGTGTGTACAAAGATCTGCTGGGCTTAAAAGACACATTGTTGATCGTGAAAGCTGTGCTGGTGGATGCAGAGCAGAAACTGGAGCAGAATCATCAACTGCGCGAATGGCTAAAGCAGCTTAAATGCGTGTTCTATGATGCCGAAGACTTAATGGATGAAGTCGAGTGCGAGGTAGCGCGAAGGGACTTGATCAAGAAACATGGTAGCACTAAAAGGAAGGTATGCCGATTCTTCTCAAGCTCTAACCCGGTTGCATTCCGATGTAGGATAGCTTATCAGATCAAAGAAATCAAAGATAGGCTAGACAAGGTTGCAGCTGACAGGAATAAGTTTGGCCTTGAAGTCATTCCCTTTGAAAGACGAGTTGTGCATAAGAGAGAAATGACACACTCTTATGTGAGTGCTTTAGATGTGATAGGACGGGATGATGATAAAGAGAATATCATTGACCTCTTGTTAAAGAAAAACAATGAGGTTGATGGTAAAAATGTCTCTGTTGTCTCCATTGTGGGGTTGGGAGGGTTAGGAAAGACCACTTTAGCCAAGTATGTGTTTAATGATAAGACCATAGATGATGTTTTTCCTTTGAAGATATGGGTGTGTGTTTCCGATGAGTTTGACCTTAAGCAGATCATGATTAAAATCTTGAATTCTTCTCCAACCTCAACTTACCTAGGAAAATTACAAGACTTAGATGTTGAGCAGCTGCAGAAACATCTCAGAGATGTTCTTGCTGATAAAAAATTCTTACTCGTCATGGACGATGTATGGAATAAAGATCGTGTCAAGTGGGAAGAGTTGAGGAACTTGTTACAAGTTGGTGCCCAAGGAAGTAAAGTTCTTGTGACCACACGTAGTCGCTCAATTGGTAGCATGATGAGCACTGGTTCCTTCTACAGTTTAGAAGGTCTATCTCATCAAGACTCCGTGTCTTTGTTTCTCAAATGGGCATTCCGACAAGGAGATGAAAAAAATCATCCACAATTGGTGGAAATTGGAGAAGGCATTGTCAGAAAATGTAGCGGGCTTCCATTGGCACTGAGAACATTAGGGAGTTCATTATTCTTAAAATTTGCCGTCAAAGAGTGGGAGTTTGTCAGAGACAATGAGATTTGGAATTTAGATCAAAAGGAAAGTGATGTCTTGCCTGCACTCAAATTCAGCTATGATCAGTTACCTTCATATTTAAAACGGTTTTTTGTATTGTTCTCCCTCTACCCAAAGGAGTATGTCTTCGATAGTTCTATTGATTCTTTGCCTTGGGAGGCACTTGGTCTTCTTCCACAAACTAATAGAGGTCAAACAGTGGATGATCTAATTAGAGAATGTCTTTCTGAGCTACAATCCATATCATTTCTTGAGGACTTTATTGACTTGGGTGGTCATTATGCATTCAAATTGCATGATTTAGTGCATGATCTTGTAATATATGTTGCAAAGGATGAGTTCCAATGTGTAAATTCTCATAATTCCCGTATACCCGAGAGCATCCGGCATTTGTCATTTATGGAAAATGAATTGGTGGACAAAGCTTCCATTCCCACGGGTGTTAGAACCATACTTTTCCCGAAATATGGTGTAGGAGCTAACAGTGAGACTTTTCTGAGTGCTCTATCAACATACAAATATTTAAGGGTTTTGGAGTTGAGTGATTCTACATATGAGACCTTGCCTCATGCAATCGGAAAGTTGAAACATTTAAGGTTCCTCTCACTAATGAGAAGTCATCAACTGAAGAAGCTCCCTGATTCATTGTGTGAACTCCAAAGTCTGCAAACTTTGATATTAGATGGGTGCAAAAAGTTGCAAACATTGCCGAAACGATTAGGAAACTTGATTAACCTTCGGCAATTGGTGATAACCAAAAATCAATTTGACTTTCCAGAAAAGGAGATTTCAAAATTGACTTGTCTAGAACTCTTGGTTGTATCTTGGGCGCATATGGAGTCTTTGTTCCAAGGGTTAGAACTTGCTAATCTTAAAACACTGTGTCTCTTTGAATGTCAGAGGTTGAAATCATTGCAACTTGAAGCTCAACATTTTCCAAATTTGGAGTCTTTGACTATTGCTGGGTGTCCAGAATTGGAATTGTCTAAAGTGCTTGAGGACCAAAACTCCAAGTTAAGGTTCAAGTCGCTGAATTTATTCTCTCTCTCAAAGCTGGTGACTTTGCCTCGATGGTTGCGACGATATTCGTACTCATTGAAGAGCTTGATTATTATGCATTGTAGCCATTTCGAGGAGCTTCCGGAGTGGCTTCCAACCATGACTTGTCTCAACATAATTGTGATAGCAAATTGTCCAAAGTTGATTTCACTCCCTGAAGGCATGCGTAATCTCACTAACCTTGAACGTCTAGTAATTGGGAATTGCCCTGAATTGTGCAAAAGATGCAAACCACATGATGGTCCTTATTGGCCCCTAATATCTCACATCAAGGATGTTAGGATTGATGATGTACGCATAATATCAAAGTAA 2565 0.4016 MAESFIFSIAESLIGKLVSQALERASRVVGVYKDLLGLKDTLLIVKAVLVDAEQKLEQNHQLREWLKQLKCVFYDAEDLMDEVECEVARRDLIKKHGSTKRKVCRFFSSSNPVAFRCRIAYQIKEIKDRLDKVAADRNKFGLEVIPFERRVVHKREMTHSYVSALDVIGRDDDKENIIDLLLKKNNEVDGKNVSVVSIVGLGGLGKTTLAKYVFNDKTIDDVFPLKIWVCVSDEFDLKQIMIKILNSSPTSTYLGKLQDLDVEQLQKHLRDVLADKKFLLVMDDVWNKDRVKWEELRNLLQVGAQGSKVLVTTRSRSIGSMMSTGSFYSLEGLSHQDSVSLFLKWAFRQGDEKNHPQLVEIGEGIVRKCSGLPLALRTLGSSLFLKFAVKEWEFVRDNEIWNLDQKESDVLPALKFSYDQLPSYLKRFFVLFSLYPKEYVFDSSIDSLPWEALGLLPQTNRGQTVDDLIRECLSELQSISFLEDFIDLGGHYAFKLHDLVHDLVIYVAKDEFQCVNSHNSRIPESIRHLSFMENELVDKASIPTGVRTILFPKYGVGANSETFLSALSTYKYLRVLELSDSTYETLPHAIGKLKHLRFLSLMRSHQLKKLPDSLCELQSLQTLILDGCKKLQTLPKRLGNLINLRQLVITKNQFDFPEKEISKLTCLELLVVSWAHMESLFQGLELANLKTLCLFECQRLKSLQLEAQHFPNLESLTIAGCPELELSKVLEDQNSKLRFKSLNLFSLSKLVTLPRWLRRYSYSLKSLIIMHCSHFEELPEWLPTMTCLNIIVIANCPKLISLPEGMRNLTNLERLVIGNCPELCKRCKPHDGPYWPLISHIKDVRIDDVRIISK 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30571g00002 854 Gene3D Ribonuclease Inhibitor 556 722 IPR032675 -
Stsc30571g00002 854 CDD RX-CC_like 2 134 IPR038005 -
Stsc30571g00002 854 Pfam Rx N-terminal domain 11 98 IPR041118 -
Stsc30571g00002 854 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 430 IPR027417 -
Stsc30571g00002 854 Gene3D - 10 124 - -
Stsc30571g00002 854 Gene3D - 147 326 IPR027417 -
Stsc30571g00002 854 PRINTS Disease resistance protein signature 272 286 - -
Stsc30571g00002 854 PRINTS Disease resistance protein signature 195 210 - -
Stsc30571g00002 854 PRINTS Disease resistance protein signature 369 383 - -
Stsc30571g00002 854 PRINTS Disease resistance protein signature 615 631 - -
Stsc30571g00002 854 Gene3D Ribonuclease Inhibitor 732 830 IPR032675 -
Stsc30571g00002 854 Pfam NB-ARC domain 171 419 IPR002182 GO:0043531
Stsc30571g00002 854 FunFam Probable disease resistance protein At1g61300 150 326 - -
Stsc30571g00002 854 SUPERFAMILY L domain-like 495 839 - -
Stsc30571g00002 854 PANTHER DISEASE RESISTANCE PROTEIN RP 52 817 IPR044974 GO:0006952
Stsc30571g00002 854 Gene3D - 332 422 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30571g00002 Stsc-Chr30571 16760 19324 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30571g00002 192 645 WRKY Transcription Factor Family AT5G45050 23.251 2.41e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30571g00002 - - gmx:100777049 876.315