Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30566g00002 ATGCAGGAGACAATTGAAAGATATCGCAAGCATACAAAGGATACACCAGCAGCAGCCAAATCAGCTGAAGAGAATGTGCAGAATTTGAAGCAAGAAGCAGCAATCTTGATGAAAAAGATTGAAATTCTTGAAGCCGCAAAAAGGAAATTCTTGGGAGAAGGTGTAGGGTCATGTAGTCTTGAAGAACTGCAACAGATAGAACAACAGTTGGAGAAGAGTGTAATCACTGTTAGAGCAAGAAAGTCTCAAGTTTTCAAGGAACAAATTGAACAACTAAAAGAAAAGGAAAAAGCCCTAGTTGCTGAAAATGCCATACTCTCTAACAAGTGTGGTATGGTTCGAAATCTAGCAACAAGTAAAACAAATAATAAGGATAAGGATCATCAGAGAGAGAATCATCAGGCTCAACACTATCCAGAAAGTAGTAGTCCAAGTTCAGATGTGGAGACTGAATTGTTCATTGGACTTCCTGAAACGAGAACAAGGCTACAAATTAATTGA 501 0.3832 MQETIERYRKHTKDTPAAAKSAEENVQNLKQEAAILMKKIEILEAAKRKFLGEGVGSCSLEELQQIEQQLEKSVITVRARKSQVFKEQIEQLKEKEKALVAENAILSNKCGMVRNLATSKTNNKDKDHQRENHQAQHYPESSSPSSDVETELFIGLPETRTRLQIN 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30566g00002 166 ProSiteProfiles K-box domain profile. 26 116 IPR002487 GO:0003700|GO:0005634|GO:0006355
Stsc30566g00002 166 MobiDBLite consensus disorder prediction 121 149 - -
Stsc30566g00002 166 Pfam K-box region 22 110 IPR002487 GO:0003700|GO:0005634|GO:0006355
Stsc30566g00002 166 Coils Coil 82 109 - -
Stsc30566g00002 166 MobiDBLite consensus disorder prediction 121 135 - -
Stsc30566g00002 166 MobiDBLite consensus disorder prediction 1 18 - -
Stsc30566g00002 166 Coils Coil 19 46 - -
Stsc30566g00002 166 Coils Coil 60 80 - -
Stsc30566g00002 166 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30566g00002 Stsc-Chr30566 16413 18493 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30566g00002 1 97 MADS-box Gene Family AT2G45660 70.103 1.70e-41 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30566g00002 - - adu:107475751 228.409