Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc30565g00005 | ATGCAAACACAAAACAAGTCACCACCCGAATCGCCCTCTAACTCACTGAGCCAACTCGCTCAGAGCATGTTCCCAACCTCCAACAACAACAACAAAAGCAACACCATCATGCTTGCAGCCATTGTTTCTCTTCTCCTTGTAATCCTCTTCGTCCTTCTTCTCCACCTCTACGCCAAATGCTTCCTCTCTCATCATCATTCCCCCCAACCACCCCAACAACCTCCCCACCGTCGCCGTCGCCGCCGTGCAACTCTCACCGCCTTTCAAGGTCCACCCCAGTTCCAGTTCCACCACTTCCGCATAGAAGATTCGCCCTTTGCAACGAAAGGACTCGATTCCGCTACGGTTTCGGCGATTCCCATGTTTGTGTACCAAGAACAGAAGCAGAAAAAAACAGAGCAAGAAGAAGAAACAGAGGAGTTAGAATGTGTGATTTGTTTGAGCGGTTTTGAAGAAGGTGAAGTTGGAAGAACGTTGCCAAAGTGTGGACACGCTTTTCACGTGGAATGCATTGATATGTGGCTAAGTTCTCATTGCAATTGTCCAATTTGTAGAGCTCCCGTTCTTGCTCTTCATCAACCGAATGATTATGATGAAGATCGTGGTGGTGTGGTTGAGATTGTTATTGGTACTCCCAGTTATGATATTAGTGAGAGTGAGAATGGGAATGATGATGATAATGATAATAATTCAGTTTCAGTTTCAGTTTCAGTTTCAGGTTCTGAAACTTCATATTCTTCTTCTTCCTCTTCGTCTTTGTTGTTGGGGTGTTCTTTGAAGAGAATGCTCAGAAAG | 795 | 0.4528 | MQTQNKSPPESPSNSLSQLAQSMFPTSNNNNKSNTIMLAAIVSLLLVILFVLLLHLYAKCFLSHHHSPQPPQQPPHRRRRRRATLTAFQGPPQFQFHHFRIEDSPFATKGLDSATVSAIPMFVYQEQKQKKTEQEEETEELECVICLSGFEEGEVGRTLPKCGHAFHVECIDMWLSSHCNCPICRAPVLALHQPNDYDEDRGGVVEIVIGTPSYDISESENGNDDDNDNNSVSVSVSVSGSETSYSSSSSSSLLLGCSLKRMLRK | 265 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc30565g00005 | 265 | CDD | RING-H2_EL5-like | 142 | 185 | - | - | |
Stsc30565g00005 | 265 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 96 | 189 | IPR013083 | - | |
Stsc30565g00005 | 265 | SMART | ring_2 | 143 | 184 | IPR001841 | - | |
Stsc30565g00005 | 265 | Pfam | Ring finger domain | 142 | 185 | IPR001841 | - | |
Stsc30565g00005 | 265 | SUPERFAMILY | RING/U-box | 121 | 191 | - | - | |
Stsc30565g00005 | 265 | ProSiteProfiles | Zinc finger RING-type profile. | 143 | 185 | IPR001841 | - | |
Stsc30565g00005 | 265 | FunFam | RING-H2 finger protein ATL1 | 98 | 190 | - | - | |
Stsc30565g00005 | 265 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 27 | 190 | IPR044675 | - | |
Stsc30565g00005 | 265 | Coils | Coil | 124 | 144 | - | - | |
Stsc30565g00005 | 265 | MobiDBLite | consensus disorder prediction | 215 | 236 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc30565g00005 | Stsc-Chr30565 | 46697 | 47524 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc30565g00005 | 24 | 191 | Rapid Response to Elicitors | AT3G16720 | 38.095 | 3.16e-30 | 113 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc30565g00005 | - | - | gmx:100777829 | 191.045 |