Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc30564g00006 ATGGAAATGCGCTGGCCAGAAATCTCTGCCTTCCCTAGGCAGATGCTCAAGAACCTTCAAAATCAAGAAACCATGGAGTTACTCTTGGAACCTACTACCATGGCCATTCTTCAGCAATCGTTGCTGACCGTTGCTGCTGTCGCCGATGACGCCCAAGAAAATCTCTTTGCCAAAACCTCAACCTTAAGCAGTAACATGGCAGAGTGGCTTTGTCACTTCCAAGATATCATGTACCTTTTGGACGAGCTTCTATGCAAGTTTGATCATGGAAAAGCAATAACAGCAACAGGTGCAGAAGATGCCAAACGTGAAGTTGACTTCATCCTTAGAAGATTTGAAACTATAACAAACCAGAAACATCTTCTCTTCCTGACTGAGAAACAAGAACAACAACTATCTTCTTTTTCTCTTCCTCCTTCTCAGAATCTAAGAAGAGATAAAGAGATGAATGAGATGGTTGACTTTTTACTCTCTGCTCGAGAAAACACGTCTATGATTGCTGTCGTTGGCGCGGCATGGACCGGAAGGGCCACTCTTGCTCACCTTGTTTGCAACCAAGACAGAGTCAAGGCCTGTTTCGAACTTCGAGGTTGGGTTGACTTTCAACAAGAGCTTGATTCCAAGAGTTTAGCTAATATAATTCTTGATAGTTTCAATGAAGATTTTCACTATGAGGAAAGTTTACCAGAACTGATTGAACGGTTGCACAAGTGCTTGCAGGGGAAGAAGGTTCTTCTTGTTTTGAACGGTTTTCGAAATCTTGCTGGCTGGGAAGCCCTTCGGTCATGCTTTTCTGGTGCTGCAGGCCAGGGAAGTGCAGTAATACTCACCACATCAGAGCTGGACGTTGCGTTCGAGATGCTTTCAGATCATGTTTTGTCATTGGAAGATTCCTTGCTGGATTCTGTTGATGAAAAGAATCGTAGTATCTCATGTGATCCACAGGGCTTTCCTGTTATGTGGACCGGCACATCTCTTTATCATCTAGTTCGCCTCGAAATTGTAGGCTCTTGGATATCATATTTGCCAGACGAGATTGGAGAACTAAGGTTTCTTGAATACATTGACCTCTCTTTCTCTGAAATTCGAGCATTGCCGGATTCAATAGGCATGCTATCTCGTTTGGAAACTTTGATGTTGGCTTTTTGCTGTTATCTCCGGGAGTTGCCAAGTACCATGGAAAATTTGATCAACCTGCGTTATCTTGATCTCATGGGAACCAAGCTGCTAGATATGGCCTTAAAGCTGGGAAGTTTTAACAACCTCCAAACATTGATTGACTTTGCGGTCAGCATGAATTCCGGGTCAAATTTGACAGAGCTTGCTACTGTATTAGATATCCAAACACTGAGTATCACAGAATTGCAGAACATTGTGGAAGCTAGGAATGCTGCAGAAGCCAAATTGAAAGAAAAGAGGCGCCTGGAAGAGCTTGTGTTGAGATGGAATCAGCTGCACTTTGCTGAATGTGAACAAGTACTAGAATATTTAGAGCCACCAAAACAGCTAAAAAATCTGGGGATTTCAGGCTGTCCTGAAAGAAGATTTCCATACTGGTTAGGGGACGCCTCGTTTACGGATTTGAAGGTGATTTATATTTATGACTGTAAGAATATTGAGTTATTGCCACCACTTGGACAGCTCTCATCTCTTCAAGAGCTCTATATTCGAGGGTGTGGCAATGTAAGATCAGTAGGTAATGAATTCTATGGACACTGTTCTTTGCATGTTCCATTTAAGTCCTTGGAGATCCTGTGGTTCGTGGACATGCCTAGTTGGAAAGAATGGATCCTCTTAGATGATGAAAGTCTTCAGTTTCCATGTCTCCGCGAGCTTTACTTGATACAATGCCCGGAGTTGGTGCAAGACTTGCCTAAGCACCTTCCTTCTCTTAAAACACTTGAAATAATTCAATGTGATCACCTCGTGTCTCCACCACCGAAGATACCTCATCAAGTCCATGAATTGATGGAACAGAAACAGGAACAAGAGCAAGGATGCACTGAGATTCTTGCAACAAGTTTGGCTGAAGTGACTTCAGAATCCTCCTCGCACCATGCCACAATTAAGGAGGGAGGAACAATTATAATGCCTCCTGTTACAAATGGTAAGGGTGATGAATTAATATCAGATGATGATGATGATGGAGGTGTGGTAGATTTTGAGTCCTGTTTTGAAATTGTGAAAATTGCAGATGCATCAGAGCTGTGCAACTTGACATCCAGAATTAAAAGCCTTAGAATTGAAGGTTGCCAATTCCTTGAGTCCCTACCAGATGAATTTCTGAAAAATTGTTCAAATATTAGAGAGTTGTTCTTTATTGATTGTTACTCTCTCAAGAACTTTTCTGATGTTCTGCACCCCAGTTCCCTGAGAACAATATATATCCACAAATGCCCAAATTTAGATTTCCTCATTCCTCTTGGAACACACAAGAAATTTGCACTCTTGGAATATCTTTGCATAAGTAGCAGCTGTGAATTGCTCGCCTCCATATCCCTAAACATTTTCCCAAGACTCAGAACTCTTTATATCAAGGATTGTCCCAATCTAGAGTCATTTTCAATAGATGAGGGACTTCGTGAACGAAATCTGAAACTTGAGTCTTTGGAAATCCGGGACTACAAATGTCCAGAACTTGAATCTTTTCCTGAAGGGGGCTTGCCATCTAGTTTAAGCTTACTTTCTATCGCCTTTTCTGATAAGCTTGCACCGAAAAAGGAGTGGAAGTTGGATATGCTTCCCTCATTAACAGACTTTGAGATTGAAAGTGGATGCATTGGCATGAAGTCATTTCCAGATAAGGACTTTTTGCCAAGAAATCTCAAGTCTTTACGCCTGAGTAAACTTTCAAGTCTCAGAATCTTGAATGGCACAGGGTTTCAGCATTTGACTGCTCTTGAGACATTGGAGATCAACTGTTGTCATGGGCTATATACCTTGCCAGAAGGGCTGCCATCATCCTTGACTCGTCTTTGCATAAAAGAGTCCCCAATATTGTCCCAGAAACTCTTCCATAGAGCGGGTTCAGAGTGGAGTAAGATAGCTCATATTCCCAACCTACAAATTGATGAAGACAAAAAAGAAGGGGAAATCCCTGAACAAAATAAAAAATTCAAGGAAAAGAGATTTGTAGCAAGATCAACATATTTGGAAGGAGGGAAAAGGATGCCAATGATGTCAAATGTATCTCACGAATCAGACTGGAGCAAGATAGCTCATACTTCCAACCTTCAACTTGGTGATGGAATCAAAGAAGGATCAACAGACTTGGAAGGCAGCTTGAAGGGCAAAAGGGGTAGCAAAGATGAAAAAAGTCTTACCAGCCAGCAATGGCACAAAACTTTAGATACAAAGAAATGGATGCCACCAACATTAAATGTACCCAACCAAGCAGAGTGCACCCGGTTTACTCATACTTTCCACGGTCCTCAACTTATAGGTGATGGAATAAAAGAAGGCAAAGGAGGCCAAGGCATTGACCATGAACCTAGCAGATTATATGACTCATGGACCTCATCAATAGAAGCAAAAACTTCACGGTTTACTCAGATTTTCAACCAAACAATGAGCAAGAAAAAAGTTAGACATTTGGAGGATTTCACCCTGCAAGAGCTACTTGAATCGACTGACAACTTCTCAGAGGACAAAAAGATAGGGAGAGGATCCTTTGGATCAGTATACCATGCTATACTGCGAGACGGTAGGGAAGTTGCAATTAAAAGAGCTGTGCCTCCCAACTTTGAAGATCGGAGGGAGTACGAGTTTGTGAATGAGCTACAGATTCACCCAAGAATCCACCACAACAACTTGGTTGGGCTATTGGGATTCTACCGTGACGCAAATGAGCGCATCTTAGTGTATGATTACATGAACAATGGCAGCCTGTATGATCATCTCCACAACGTCCAAAGTTCTTCTGTTCTAATGTCATGGCCGGCACGGATCAAGGTAGCACTGGATGCAGCAAGGGGCATAGAGTACCTCCACCACTATGCTGTCCCACCGATCATTCATCACGACATAAAGTCACCCAACATATTACTGGATTCCAAGTGGACAGCCAAATTGTGTGATTTTGGAATCTCATTGAAGGCTCCTGAAGATGATATGGATACACATACTACAGTTGAATTAGCCGGCACACTCGGCTACCTGGACCCTGAATACATCACGACTCAAAGGTTAACCACAAAGAGTGATGTTTATGGTTTTGGAGTTGTTTTGCTAGAAATTCTAACCGGCCGCAAAGCCACACATACCGATGGGGAAAGAATATATTTGCCAAGTTATGCGGTACCTTATATTGATAAAGGTGAGCTTTTCAAGGTTTTGGATCCAAGAATGCCACCCCCAACAGCTGCTGTAGAGTACTTGGGGAATTTAGCAGCACAATGTGTGCGTCCCAAGAGTCAAGATAGGCCAACCATGTTTGAAGTTGTAATTCACTTGGAAAGAGCATTAGCTTCTTGTTTGGCTCTACCAGCAATATGA 4494 0.423 MEMRWPEISAFPRQMLKNLQNQETMELLLEPTTMAILQQSLLTVAAVADDAQENLFAKTSTLSSNMAEWLCHFQDIMYLLDELLCKFDHGKAITATGAEDAKREVDFILRRFETITNQKHLLFLTEKQEQQLSSFSLPPSQNLRRDKEMNEMVDFLLSARENTSMIAVVGAAWTGRATLAHLVCNQDRVKACFELRGWVDFQQELDSKSLANIILDSFNEDFHYEESLPELIERLHKCLQGKKVLLVLNGFRNLAGWEALRSCFSGAAGQGSAVILTTSELDVAFEMLSDHVLSLEDSLLDSVDEKNRSISCDPQGFPVMWTGTSLYHLVRLEIVGSWISYLPDEIGELRFLEYIDLSFSEIRALPDSIGMLSRLETLMLAFCCYLRELPSTMENLINLRYLDLMGTKLLDMALKLGSFNNLQTLIDFAVSMNSGSNLTELATVLDIQTLSITELQNIVEARNAAEAKLKEKRRLEELVLRWNQLHFAECEQVLEYLEPPKQLKNLGISGCPERRFPYWLGDASFTDLKVIYIYDCKNIELLPPLGQLSSLQELYIRGCGNVRSVGNEFYGHCSLHVPFKSLEILWFVDMPSWKEWILLDDESLQFPCLRELYLIQCPELVQDLPKHLPSLKTLEIIQCDHLVSPPPKIPHQVHELMEQKQEQEQGCTEILATSLAEVTSESSSHHATIKEGGTIIMPPVTNGKGDELISDDDDDGGVVDFESCFEIVKIADASELCNLTSRIKSLRIEGCQFLESLPDEFLKNCSNIRELFFIDCYSLKNFSDVLHPSSLRTIYIHKCPNLDFLIPLGTHKKFALLEYLCISSSCELLASISLNIFPRLRTLYIKDCPNLESFSIDEGLRERNLKLESLEIRDYKCPELESFPEGGLPSSLSLLSIAFSDKLAPKKEWKLDMLPSLTDFEIESGCIGMKSFPDKDFLPRNLKSLRLSKLSSLRILNGTGFQHLTALETLEINCCHGLYTLPEGLPSSLTRLCIKESPILSQKLFHRAGSEWSKIAHIPNLQIDEDKKEGEIPEQNKKFKEKRFVARSTYLEGGKRMPMMSNVSHESDWSKIAHTSNLQLGDGIKEGSTDLEGSLKGKRGSKDEKSLTSQQWHKTLDTKKWMPPTLNVPNQAECTRFTHTFHGPQLIGDGIKEGKGGQGIDHEPSRLYDSWTSSIEAKTSRFTQIFNQTMSKKKVRHLEDFTLQELLESTDNFSEDKKIGRGSFGSVYHAILRDGREVAIKRAVPPNFEDRREYEFVNELQIHPRIHHNNLVGLLGFYRDANERILVYDYMNNGSLYDHLHNVQSSSVLMSWPARIKVALDAARGIEYLHHYAVPPIIHHDIKSPNILLDSKWTAKLCDFGISLKAPEDDMDTHTTVELAGTLGYLDPEYITTQRLTTKSDVYGFGVVLLEILTGRKATHTDGERIYLPSYAVPYIDKGELFKVLDPRMPPPTAAVEYLGNLAAQCVRPKSQDRPTMFEVVIHLERALASCLALPAI 1497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc30564g00006 1497 Pfam Protein kinase domain 1214 1483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30564g00006 1497 SUPERFAMILY Protein kinase-like (PK-like) 1193 1485 IPR011009 -
Stsc30564g00006 1497 SUPERFAMILY L domain-like 736 1011 - -
Stsc30564g00006 1497 Gene3D Ribonuclease Inhibitor 310 669 IPR032675 -
Stsc30564g00006 1497 ProSitePatterns Protein kinases ATP-binding region signature. 1219 1241 IPR017441 GO:0005524
Stsc30564g00006 1497 Gene3D - 123 292 IPR027417 -
Stsc30564g00006 1497 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 290 IPR027417 -
Stsc30564g00006 1497 Gene3D Ribonuclease Inhibitor 867 1023 IPR032675 -
Stsc30564g00006 1497 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 1172 1492 IPR044815 GO:0004674
Stsc30564g00006 1497 Gene3D Ribonuclease Inhibitor 717 866 IPR032675 -
Stsc30564g00006 1497 SUPERFAMILY L domain-like 315 652 - -
Stsc30564g00006 1497 SMART serkin_6 1213 1492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30564g00006 1497 Gene3D Phosphorylase Kinase; domain 1 1183 1290 - -
Stsc30564g00006 1497 Gene3D Transferase(Phosphotransferase) domain 1 1291 1491 - -
Stsc30564g00006 1497 ProSiteProfiles Protein kinase domain profile. 1213 1486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc30564g00006 1497 MobiDBLite consensus disorder prediction 1080 1111 - -
Stsc30564g00006 1497 MobiDBLite consensus disorder prediction 1089 1110 - -
Stsc30564g00006 1497 Coils Coil 98 118 - -
Stsc30564g00006 1497 CDD STKc_IRAK 1219 1486 - -
Stsc30564g00006 1497 Pfam NB-ARC domain 146 289 IPR002182 GO:0043531
Stsc30564g00006 1497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1337 1349 IPR008271 GO:0004672|GO:0006468
Stsc30564g00006 1497 Coils Coil 455 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc30564g00006 Stsc-Chr30564 31800 37723 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc30564g00006 1162 1495 Receptor kinase-like Gene Family AT5G47850 51.282 5.45e-93 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Stsc30564g00006 Pkinase 8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc30564g00006 - - aip:107629709 1948.71